Miyakogusa Predicted Gene

Lj0g3v0090989.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0090989.3 tr|G7LF30|G7LF30_MEDTR Resistance protein
OS=Medicago truncatula GN=MTR_8g011950 PE=4 SV=1,45.37,2e-19,
,CUFF.4949.3
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI...   180   5e-45
gnl|LJGI|DC595274                                                      68   5e-11

>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
           Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
           truncatula (Barrel medic), partial (11%)
          Length = 581

 Score =  180 bits (91), Expect = 5e-45
 Identities = 184/215 (85%)
 Strand = Plus / Plus

                                                                       
Query: 32  acatcacaacagaaggcctgaaaaatttgttggtgataaattgcacaaagaacaccattc 91
           |||| ||| |||| |||||  ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 320 acataacatcagatggccttcaaaatgtgttggtgataaattgcacaaagaacacaattc 379

                                                                       
Query: 92  agctctataagaaagatgcattagattccttcgatgatgaggagtggcagaaagtagtat 151
           ||||||||||||   |||||||||  ||||| || ||||| |||||||||| ||||||||
Sbjct: 380 agctctataagaggaatgcattagcctcctttgaagatgaagagtggcagagagtagtat 439

                                                                       
Query: 152 caaatatagaacctggtaatgaagtgaaggtagttgttgtttttgagaatggattcattg 211
           ||||||| ||||| |||||  |||| ||| | || |||||||||||||| ||||||| ||
Sbjct: 440 caaatattgaaccgggtaacaaagtaaagatggtggttgtttttgagaacggattcactg 499

                                              
Query: 212 tgaagaagacagttgtttatctcatatatgatgaa 246
           |||||||||||   ||||||||  |||||||||||
Sbjct: 500 tgaagaagacaacagtttatcttgtatatgatgaa 534


>gnl|LJGI|DC595274 
          Length = 470

 Score = 67.9 bits (34), Expect = 5e-11
 Identities = 68/78 (87%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 386 ggttgaccggtctagctgttgtcttgatttggtctcgctacttctctaaccagcgaagga 445
           |||||| ||||||||||||| |||||||||||||||||| ||| | ||| |||||| | |
Sbjct: 1   ggttgatcggtctagctgttatcttgatttggtctcgctgcttttttaatcagcgacgaa 60

                             
Query: 446 gacat-aacccattttaa 462
           ||| | ||||||||||||
Sbjct: 61  gacgtaaacccattttaa 78