Miyakogusa Predicted Gene

Lj0g3v0089779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0089779.1 Non Chatacterized Hit- tr|I1LXQ3|I1LXQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43146
PE,66.76,0,BRCA2_REPEAT,BRCA2 repeat; Nucleic acid-binding
proteins,Nucleic acid-binding, OB-fold-like; BRCA2 h,CUFF.4845.1
         (3201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054614 weakly similar to UniRef100_A7QFE8 Cluster: Ch...   765   0.0  

>gnl|LJGI|BP054614 weakly similar to UniRef100_A7QFE8 Cluster: Chromosome chr8
            scaffold_88, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 511

 Score =  765 bits (386), Expect = 0.0
 Identities = 386/386 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2816 gtcagcaaaagaagcaatggatttttgtgtctgatggatccatgtatggtttgcaatcag 2875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511  gtcagcaaaagaagcaatggatttttgtgtctgatggatccatgtatggtttgcaatcag 452

                                                                        
Query: 2876 aaaagttaaccaacactttgcttgccatctgcttttgctctccattgattgatcatgatt 2935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451  aaaagttaaccaacactttgcttgccatctgcttttgctctccattgattgatcatgatt 392

                                                                        
Query: 2936 catttccaccaatcaactataaccttgctggatccacggttggtttctgtaatcttatta 2995
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391  catttccaccaatcaactataaccttgctggatccacggttggtttctgtaatcttatta 332

                                                                        
Query: 2996 aaaaggaaaaggaccacacgaaccatgtctgggttgctgatgctactgaaagctcgacct 3055
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331  aaaaggaaaaggaccacacgaaccatgtctgggttgctgatgctactgaaagctcgacct 272

                                                                        
Query: 3056 attatttgaattttgattccccttactgttctcacctcagaaacgctgccagctccgtca 3115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271  attatttgaattttgattccccttactgttctcacctcagaaacgctgccagctccgtca 212

                                                                        
Query: 3116 gagcatgggcaagcaattctagcttgacaatagagaaactcaaggaaaaggtgttgctta 3175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211  gagcatgggcaagcaattctagcttgacaatagagaaactcaaggaaaaggtgttgctta 152

                                      
Query: 3176 tgattggtgatagtagaacctgaaac 3201
            ||||||||||||||||||||||||||
Sbjct: 151  tgattggtgatagtagaacctgaaac 126