Miyakogusa Predicted Gene
- Lj0g3v0089599.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0089599.1 Non Chatacterized Hit- tr|G7KSD2|G7KSD2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,31.52,1e-18,TPR_11,NULL; coiled-coil,NULL;
TPR,Tetratricopeptide repeat; TPR_REGION,Tetratricopeptide
repeat-con,CUFF.4877.1
(945 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80479 similar to UniRef100_A7NYB1 Cluster: Chromosome... 573 e-163
gnl|LJGI|TC67899 similar to UniRef100_O65020 Cluster: Ethylene-o... 94 2e-18
>gnl|LJGI|TC80479 similar to UniRef100_A7NYB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 669
Score = 573 bits (289), Expect = e-163
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 657 ggccgatcttgatgttgcaacacaacttgatcctttaaggacatacccttatagatacag 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggccgatcttgatgttgcaacacaacttgatcctttaaggacatacccttatagatacag 61
Query: 717 ggcagcagtgatgatggatgagcaaaaggaaactgaagctgtagaggaactcacaaaggc 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggcagcagtgatgatggatgagcaaaaggaaactgaagctgtagaggaactcacaaaggc 121
Query: 777 cataaaattcaagcctgacgtgcaaatgcttcatctgcgagcagcattttacgagtcaat 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cataaaattcaagcctgacgtgcaaatgcttcatctgcgagcagcattttacgagtcaat 181
Query: 837 gggagacctatcctctgctatccaagactgtcaggcagctctttgcttagaccccaacca 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gggagacctatcctctgctatccaagactgtcaggcagctctttgcttagaccccaacca 241
Query: 897 tgctggcacacttgacctgtatcaaaggacacgcaaattgaacatctaa 945
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgctggcacacttgacctgtatcaaaggacacgcaaattgaacatctaa 290
>gnl|LJGI|TC67899 similar to UniRef100_O65020 Cluster: Ethylene-overproduction
protein 1; n=1; Arabidopsis thaliana|Rep:
Ethylene-overproduction protein 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (28%)
Length = 1393
Score = 93.7 bits (47), Expect = 2e-18
Identities = 191/239 (79%)
Strand = Plus / Plus
Query: 509 gagctcatcagggtctggcaagagtttatcatcagaaaagtcaaagaaaagctgcatatg 568
|||| |||||||| ||||| | || ||||||| |||| |||| | |||||||||||||
Sbjct: 411 gagcacatcagggattggcacgtgtatatcatcttaaaaatcaacgcaaagctgcatatg 470
Query: 569 atgagatgaccaagctaattgagaaggcggagagtaatgcttcagcatatgaaaaacgat 628
|||||||||| || |||||||| ||||| || |||||| || || | ||| ||||| |
Sbjct: 471 atgagatgacaaaactaattgaaaaggcctggaataatgcatcggcttttgagaaacggt 530
Query: 629 cagaatactgtgaccgtgagatcgcaaaggccgatcttgatgttgcaacacaacttgatc 688
||||||| |||||||| || || |||||| |||||| | | |||||||| | ||||
Sbjct: 531 cagaatattgtgaccgcgatatggcaaagagtgatcttagtatggcaacacagttggatc 590
Query: 689 ctttaaggacatacccttatagatacagggcagcagtgatgatggatgagcaaaaggaa 747
|| |||||||||| ||||| ||||| |||||||| || | |||||||| || ||||||
Sbjct: 591 ctctaaggacatatccttacagatatagggcagccgttttaatggatgatcataaggaa 649