Miyakogusa Predicted Gene
- Lj0g3v0089459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0089459.1 tr|G7IHS5|G7IHS5_MEDTR Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
OS,83.28,0,PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT,NULL; PROTEIN
FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANY,CUFF.4824.1
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72784 similar to UniRef100_O24304 Cluster: Protein fa... 1096 0.0
gnl|LJGI|TC76845 similar to UniRef100_O24304 Cluster: Protein fa... 674 0.0
>gnl|LJGI|TC72784 similar to UniRef100_O24304 Cluster: Protein
farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha; n=1; Pisum sativum|Rep: Protein
farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha - Pisum sativum (Garden pea), partial
(54%)
Length = 581
Score = 1096 bits (553), Expect = 0.0
Identities = 556/557 (99%)
Strand = Plus / Plus
Query: 1 atggaatcggaagaggagcgtgtgcggctgagggatagggcggagtggtcggatgttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atggaatcggaagaggagcgtgtgcggctgagggatagggcggagtggtcggatgttaca 84
Query: 61 ccggtgccgcaaaacgacggcccaaacccggtggttccgatcagctacaccgaagacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccggtgccgcaaaacgacggcccaaacccggtggttccgatcagctacaccgaagacttc 144
Query: 121 gccgaagtcatggactacttccgagccatctacctcgctaatgaacactcttcacgcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccgaagtcatggactacttccgagccatctacctcgctaatgaacactcttcacgcgcc 204
Query: 181 ctttccctaaccgccgaggtcatccacttcaacgccggaaactacaccgtgtggcatttc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctttccctcaccgccgaggtcatccacttcaacgccggaaactacaccgtgtggcatttc 264
Query: 241 cggcggttgttacttgagtcactgaaagttgatctgcacggtgaactagagtatgtggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cggcggttgttacttgagtcactgaaagttgatctgcacggtgaactagagtatgtggag 324
Query: 301 cgtgtagccagtgccaattcaaaaaattatcagatttggcatcatagacgatgggttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtgtagccagtgccaattcaaaaaattatcagatttggcatcatagacgatgggttgct 384
Query: 361 gagaaattaggtgttgaggctagacatattgaacttgagttcaccagaaagatattgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagaaattaggtgttgaggctagacatattgaacttgagttcaccagaaagatattgtcc 444
Query: 421 gttgacgccaaacattatcatgcatggtcgcataggcagtgggttcttcaaacacttgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgacgccaaacattatcatgcatggtcgcataggcagtgggttcttcaaacacttgga 504
Query: 481 ggatgggaagatgaactcaattattgtagtcaacttcttgaagaagacatatttaacaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggatgggaagatgaactcaattattgtagtcaacttcttgaagaagacatatttaacaac 564
Query: 541 tccgcttggaatcagag 557
|||||||||||||||||
Sbjct: 565 tccgcttggaatcagag 581
>gnl|LJGI|TC76845 similar to UniRef100_O24304 Cluster: Protein
farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha; n=1; Pisum sativum|Rep: Protein
farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha - Pisum sativum (Garden pea), partial
(33%)
Length = 433
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 654 tgaaaacgaaagttcatggagatatcttcgaggacttttcaaaggggaaaccgcattata 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaaacgaaagttcatggagatatcttcgaggacttttcaaaggggaaaccgcattata 60
Query: 714 tgtaaatgaccctcaagttccttcagtatgtttaaagattttgaatactaagagcaatta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaaatgaccctcaagttccttcagtatgtttaaagattttgaatactaagagcaatta 120
Query: 774 tttgtttgctcttagtactcttttggatcttattagcctcggttatcaaccaaatgaaga 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgtttgctcttagtactcttttggatcttattagcctcggttatcaaccaaatgaaga 180
Query: 834 cttcagagatgccattgaggctataaagacttcggattttgataaacaagatcatgatat 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcagagatgccattgaggctataaagacttcggattttgataaacaagatcatgatat 240
Query: 894 agccagaaatatttgttctatcttagaacaagttgatcccattagagcaaactattggat 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agccagaaatatttgttctatcttagaacaagttgatcccattagagcaaactattggat 300
Query: 954 ctggcgcaagtgtagagtttctcaggtggcggcatagtac 993
||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggcgcaagtgtagagtttctcaggtggcggcatagtac 340