Miyakogusa Predicted Gene
- Lj0g3v0088939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0088939.1 Non Chatacterized Hit- tr|I1NH04|I1NH04_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41913 PE,77.01,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; ABC transporter
transmembrane region,ABC ,CUFF.4778.1
(3207 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosom... 266 8e-70
gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromoso... 262 1e-68
gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch... 232 1e-59
gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosom... 190 4e-47
>gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 733
Score = 266 bits (134), Expect = 8e-70
Identities = 206/230 (89%)
Strand = Plus / Plus
Query: 2960 cagttgttgaagatggatcaaactggagcaccggacaaaggcagttattctgcttaggac 3019
|||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |
Sbjct: 240 cagttgttgaagatggatcaaactggagcatgggacaaaggcaattattctgtttggggc 299
Query: 3020 gcgctcttttgaggaagagtaggatattggtgctggatgaagcaactgcatcaattgata 3079
|||| |||||||| | ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 300 gcgcacttttgagaagaagtaggatattggtgctggatgaagcaactgcatcgatcgata 359
Query: 3080 atgcaactgatttgattctgcaaaaaacaatcaagactgaatttgcagattgtacagtca 3139
|||||||||||||||||||||||||||| || | |||||| ||||||||||| ||||| |
Sbjct: 360 atgcaactgatttgattctgcaaaaaaccattaggactgagtttgcagattgcacagtga 419
Query: 3140 tcactgtagcccacaggataccaaccgtgatgaattgcactatggttctt 3189
|||| | || |||||||||||||| |||||| |||||||||||||||||
Sbjct: 420 tcacagctgcacacaggataccaacagtgatggattgcactatggttctt 469
>gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 688
Score = 262 bits (132), Expect = 1e-68
Identities = 281/330 (85%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 2870 tatctcaacactctgatcaagaaatatgggaggttcttcgcaagtgtcagttgcaagatg 2929
||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| |
Sbjct: 1 tatctcaacactctgatcaagaaatatgggaggttctgggaaagtgtcaattgcaagaag 60
Query: 2930 ctgtcaaggataaag---gtggcttagagtcttcagttgttgaagatggatcaaactgga 2986
||||| | || |||| | || ||||| || ||||||||||||||||| |||||||||
Sbjct: 61 ctgtccaagagaaagaagggggattagactcctcagttgttgaagatggggcaaactgga 120
Query: 2987 gcaccggacaaaggcagttattctgcttaggacgcgctcttttgaggaagagtaggatat 3046
||| |||||||||||||||||||| || || ||||| || | |||| ||||||||||
Sbjct: 121 gcatgggacaaaggcagttattctgtttggggcgcgccctcctaaggagaagtaggatat 180
Query: 3047 tggtgctggatgaagcaactgcatcaattgataatgcaactgatttgattctgcaaaaaa 3106
||||||| |||||||| ||||| ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 181 tggtgctcgatgaagcgactgcttcaatcgataatgcgactgatttaattctacagaaaa 240
Query: 3107 caatcaagactgaatttgcagattgtacagtcatcactgtagcccacaggataccaaccg 3166
| || | |||||| ||||||||||||||||| || || || || |||||||| ||||| |
Sbjct: 241 ccattaggactgagtttgcagattgtacagtaattacagttgctcacaggattccaactg 300
Query: 3167 tgatgaattgcactatggttcttgccatca 3196
||||| ||||||||| ||||||||||||||
Sbjct: 301 tgatggattgcactaaggttcttgccatca 330
>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 557
Score = 232 bits (117), Expect = 1e-59
Identities = 186/209 (88%)
Strand = Plus / Plus
Query: 1333 ttgatgtcatatggaaaatccctacaagctgccccttatcaccatctattgagctcaaac 1392
||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 345 ttgatgtcaggtggaaaatccctacaagctgctccttatcaccatctattgacctcaagc 404
Query: 1393 caagaatttcaggacctagtcaatgctcacaaagagactgctggttctgaccagcctgta 1452
|||| ||||||||| |||||||||||||||||||| |||||||||||||||| || ||||
Sbjct: 405 caaggatttcaggatctagtcaatgctcacaaagaaactgctggttctgaccggcttgta 464
Query: 1453 gatgttacttcttcccatgaacattcaaattcggatagagaggttacacaatccttcaaa 1512
||||||||||||||||| || ||||||||| | ||||||| ||| | |||| | ||||
Sbjct: 465 gatgttacttcttcccagagaccttcaaattctggtagagagattataaaatcttccaaa 524
Query: 1513 cagaagcagtttaaagcaatgaatggtga 1541
|||||||||||||||||| | ||||||||
Sbjct: 525 cagaagcagtttaaagcattaaatggtga 553
>gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 209
Score = 190 bits (96), Expect = 4e-47
Identities = 154/174 (88%)
Strand = Plus / Plus
Query: 1077 gtttccccatggtgaccttactgaaataggtgagagaggagttaacctaagtggaggtca 1136
|||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 3 gtttccccatggtgacctcactgaaataggtgaaagaggagtaaacctcagtggaggaca 62
Query: 1137 gaagcagcgtattcaactggcccgtgctctttatcagaatgctgatgtatatctcctgga 1196
|||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 63 aaagcagcgagttcaactcgcccgtgctctttatcaaaatgctgatgtatatcttttgga 122
Query: 1197 tgatccattcagtgctgttgatgcacacactgccacaaacttgttcagtgaata 1250
||||||| ||| |||||||||||| || ||||| |||| ||||||| ||||||
Sbjct: 123 tgatccantcantgctgttgatgcgcatactgcttcaaatttgttcaatgaata 176