Miyakogusa Predicted Gene
- Lj0g3v0088499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0088499.1 Non Chatacterized Hit- tr|K3ZET4|K3ZET4_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,29.14,0.0000002,L domain-like,NULL; seg,NULL; no description,NULL;
PREDICTED PROTEIN,NULL; FAMILY NOT NAMED,NULL; LR,CUFF.4760.1
(1701 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68119 similar to UniRef100_A7PES6 Cluster: Chromosome... 846 0.0
gnl|LJGI|TC75456 similar to UniRef100_A7PES6 Cluster: Chromosome... 111 1e-23
gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin c... 54 3e-06
>gnl|LJGI|TC68119 similar to UniRef100_A7PES6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 712
Score = 846 bits (427), Expect = 0.0
Identities = 430/431 (99%)
Strand = Plus / Plus
Query: 1 atggggaagaaagcagcgtgttggtgttccaatcttttgattctttaccctattctgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atggggaagaaagcagcgtgttggtgttccaatcttttgattctttaccctattctgtta 341
Query: 61 atagccgtcacagtcacattctccgccacttcctccgccgcacacagagtctccgatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atagccgtcacagtcacattctccgccacttcctccgccgcacacagagtctccgatggc 401
Query: 121 ggcctcacagacgccgaagccatgtacattaagcagcgtcagcttctgtactatagagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggcctcacagacgccgaagccatgtacattaagcagcgtcagcttctgtactatagagat 461
Query: 181 gagttcggtgacagaggtgagaaggtcacggtggacccgtcgttggtgttcgagaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gagttcggtgacagaggtgagaaggtcacggtggacccgtcgttggtgttcgagaacaac 521
Query: 241 cgcatcagaaacgcttacatagctttacaagcttggaaggaagccattctctccgatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cgcatcagaaacgcttacatagctttacaagcttggaaggaagccattctctccgatccc 581
Query: 301 aggaactacactgttaactgggttggggctgatgtttgtagctatagcggtgttttctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggaactacactgttaactgggttggggctgatgtttgtagctatagcggtgttttctgt 641
Query: 361 gctcccgcgccggataatcctaagatccggacggttgccggcattgacctcaaccacggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 642 gctcccgcgccggataatcctaagatccggacggttgccggcattgacctcaagcacggt 701
Query: 421 gacattgccgg 431
|||||||||||
Sbjct: 702 gacattgccgg 712
>gnl|LJGI|TC75456 similar to UniRef100_A7PES6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 621
Score = 111 bits (56), Expect = 1e-23
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 376 aatcctaagatccggacggttgccggcattgacctcaaccacggtgacattgccgggtat 435
||||| |||||||| || || || |||||||||||||||||||||||||||||||| |||
Sbjct: 456 aatcccaagatccgcaccgtcgcaggcattgacctcaaccacggtgacattgccggatat 515
Query: 436 ttgccggaggagctgggtttgctcacagatcttgcgctgttcca 479
| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 516 ctcccggacgagctcggcttgctcacagatcttgcgctcttcca 559
>gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(41%)
Length = 895
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1505 tactactacaactcaccgccaccaccatcaccatc 1539
||||||||||| ||||| |||||||||||||||||
Sbjct: 47 tactactacaaatcaccaccaccaccatcaccatc 81