Miyakogusa Predicted Gene
- Lj0g3v0088419.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0088419.2 tr|C7IY37|C7IY37_ORYSJ Os02g0519300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os02g05193,50,1e-18,seg,NULL; coiled-coil,NULL,CUFF.4738.2
(573 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66326 similar to UniRef100_A7PL25 Cluster: Chromosome... 351 3e-96
gnl|LJGI|TC81949 similar to UniRef100_A7PL25 Cluster: Chromosome... 238 3e-62
gnl|LJGI|TC70093 similar to UniRef100_A7PL25 Cluster: Chromosome... 98 7e-20
>gnl|LJGI|TC66326 similar to UniRef100_A7PL25 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 890
Score = 351 bits (177), Expect = 3e-96
Identities = 311/345 (90%), Gaps = 8/345 (2%)
Strand = Plus / Plus
Query: 1 atgaaacaaatgaaaatggactgggttccatatatccctctggagaaccgagaaagccag 60
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 554 atgaaacaaatgaaaatggactgggttccatatatccctcttgagcaccgagaaagccag 613
Query: 61 gttgataggttgaagtctcaaatatttatcttgagttgcacccaaagaagggctgctttg 120
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 614 gttgataggttgaagtctcaaatttttatcttgagttgcacccaaaggagggctgctttg 673
Query: 121 aaacatatgaagattgatcgtgtgaagaaatatgactactgcttgccttatttctacgac 180
|||||| ||||| | |||||||| |||||||| || |||||||||||||||||||| |
Sbjct: 674 aaacatctgaagttggatcgtgtaaagaaatacgagtactgcttgccttatttctatcag 733
Query: 181 ccatttaaggaagatgagcttgaacagagcactgaggttccaatactatttccagcagag 240
|||||||| |||||||| ||||||||||||||||| |||| |||| ||||||||| ||||
Sbjct: 734 ccatttaa-gaagatgaacttgaacagagcactga-gttcaaataatatttccaggagag 791
Query: 241 ccaaatccggttgtctgtggttttgattgggaattagatgaacttgaggagttcactgat 300
||||| ||| | |||||| |||||||||| ||||||||||||||| ||| ||||||||
Sbjct: 792 ccaaaaccgatcttctgtgaatttgattggg-attagatgaacttga-gag-tcactgat 848
Query: 301 aagctcatacagaaggaggtgttatcagaagatcacaaagatgct 345
|||||||| || | |||| ||||||||||||||| |||||||||
Sbjct: 849 -agctcatagagga-gaggagttatcagaagatca-aaagatgct 890
>gnl|LJGI|TC81949 similar to UniRef100_A7PL25 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 903
Score = 238 bits (120), Expect = 3e-62
Identities = 264/312 (84%)
Strand = Plus / Plus
Query: 1 atgaaacaaatgaaaatggactgggttccatatatccctctggagaaccgagaaagccag 60
|||||||||||||||||||||||||||||||| || ||| ||||||||||| ||| |
Sbjct: 576 atgaaacaaatgaaaatggactgggttccatacattcctttggagaaccgaagtagcatg 635
Query: 61 gttgataggttgaagtctcaaatatttatcttgagttgcacccaaagaagggctgctttg 120
|||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 636 gttgatagactgaactctcaaatatttatcttgagttgcactcaaagaaggtctgctttg 695
Query: 121 aaacatatgaagattgatcgtgtgaagaaatatgactactgcttgccttatttctacgac 180
||||| ||||| | ||| | | || ||||| || ||||||||||||||||| || |
Sbjct: 696 aaacacctgaaggtggataggctaaaaaaatacgaatactgcttgccttatttttatcag 755
Query: 181 ccatttaaggaagatgagcttgaacagagcactgaggttccaatactatttccagcagag 240
|| |||||||||||||| ||||| |||||||||||||||| ||| | |||||| | |||
Sbjct: 756 ccttttaaggaagatgaacttgagcagagcactgaggttcaaatcatttttccatctgag 815
Query: 241 ccaaatccggttgtctgtggttttgattgggaattagatgaacttgaggagttcactgat 300
| ||| ||| | |||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 816 caaaagccgatcttctgtgaatttgattgggagatggatgaacttgaggagttcactgat 875
Query: 301 aagctcatacag 312
|| |||||||||
Sbjct: 876 aatctcatacag 887
>gnl|LJGI|TC70093 similar to UniRef100_A7PL25 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 584
Score = 97.6 bits (49), Expect = 7e-20
Identities = 120/144 (83%)
Strand = Plus / Plus
Query: 376 gaagcaaagaaaactaatagagaggcaagggaagctcgaagaaaagccattgaagaaatg 435
|||||||||| | | ||||||||||||| |||||| | |||||||||||||||||||||
Sbjct: 13 gaagcaaagagagccnatagagaggcaagagaagctaggagaaaagccattgaagaaatg 72
Query: 436 agggaggaaactaaagctgtaattaagaataagcgatcttataagttctaccctgtgaaa 495
|| |||||||||||||||| || ||| || | | |||||||||||||||||| ||
Sbjct: 73 agcgaggaaactaaagctgcctttgagagtatgaagttttataagttctaccctgttcaa 132
Query: 496 agtccagacacacctgatgtatca 519
|||||| ||||||||| |||||
Sbjct: 133 tctccagatacacctgatttatca 156