Miyakogusa Predicted Gene

Lj0g3v0087919.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087919.1 Non Chatacterized Hit- tr|I1R7S0|I1R7S0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,47.42,0.00000000000005,seg,NULL; A_tha_TIGR01569: plant integral
membrane protein T,Uncharacterised protein family UPF0497,,CUFF.4700.1
         (456 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594153 weakly similar to UniRef100_A7QC16 Cluster: Ch...   904   0.0  
gnl|LJGI|GO036682 weakly similar to UniRef100_Q9FI10 Cluster: UP...   682   0.0  

>gnl|LJGI|DC594153 weakly similar to UniRef100_A7QC16 Cluster: Chromosome chr10
           scaffold_76, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr10 scaffold_76, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (37%)
          Length = 587

 Score =  904 bits (456), Expect = 0.0
 Identities = 456/456 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctcagaaaatgcagaaaaacttgagcttggttcaagtgctgttcctgatcagacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  atggcctcagaaaatgcagaaaaacttgagcttggttcaagtgctgttcctgatcagacc 73

                                                                       
Query: 61  aagccaaagaaggattggatccttttgtctctcagggtggttgcacttttggccactgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  aagccaaagaaggattggatccttttgtctctcagggtggttgcacttttggccactgca 133

                                                                       
Query: 121 tctgccacacttgttatggcactcaataaacaatccaaaaacttggtggttgcaaccatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tctgccacacttgttatggcactcaataaacaatccaaaaacttggtggttgcaaccatt 193

                                                                       
Query: 181 ggtaccaatccaataacagctacaatctctgcaaagtttcaccatactccagcttttgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggtaccaatccaataacagctacaatctctgcaaagtttcaccatactccagcttttgtg 253

                                                                       
Query: 241 ttctttgttatagctaatggaattgccagcgttcataacatggtggtcatagcgttggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttctttgttatagctaatggaattgccagcgttcataacatggtggtcatagcgttggat 313

                                                                       
Query: 301 tttttaggaccccggtttgataaccaaggactttatcttacactgattgcaatatttgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttttaggaccccggtttgataaccaaggactttatcttacactgattgcaatatttgac 373

                                                                       
Query: 361 atggtacagaatggctcccatgttacactgataacttttgagtgctcggctgcctgcaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atggtacagaatggctcccatgttacactgataacttttgagtgctcggctgcctgcaat 433

                                               
Query: 421 cgcaattttgcgaccacaatcccaaccgcgatttaa 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 434 cgcaattttgcgaccacaatcccaaccgcgatttaa 469


>gnl|LJGI|GO036682 weakly similar to UniRef100_Q9FI10 Cluster: UPF0497 membrane
           protein At5g44550; n=1; Arabidopsis thaliana|Rep:
           UPF0497 membrane protein At5g44550 - Arabidopsis
           thaliana (Mouse-ear cress), partial (46%)
          Length = 716

 Score =  682 bits (344), Expect = 0.0
 Identities = 360/364 (98%), Gaps = 1/364 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctcagaaaatgcagaaaaacttgagcttggttcaagtgctgttcctgatcagacc 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atggcctcagaaaatgcaaaaaaacttgagcttggttcaagtgctgttcctgatcagacc 106

                                                                       
Query: 61  aagccaaagaaggattggatccttttgtctctcagggtggttgcacttttggccactgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aagccaaagaaggattggatccttttgtctctcagggtggttgcacttttggccactgca 166

                                                                       
Query: 121 tctgccacacttgttatggcactcaataaacaatccaaaaacttggtggttgcaaccatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tctgccacacttgttatggcactcaataaacaatccaaaaacttggtggttgcaaccatt 226

                                                                       
Query: 181 ggtaccaatccaataacagctacaatctctgcaaagtttcaccatactccagcttttgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggtaccaatccaataacagctacaatctctgcaaagtttcaccatactccagcttttgtg 286

                                                                       
Query: 241 ttctttgttatagctaatggaattgccagcgttcataacatggtggtcatagcgttgga- 299
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 287 ttctttgttatagttaatggaattgccagcgttcgtaacatggtggtcatagcgttggat 346

                                                                       
Query: 300 ttttttaggaccccggtttgataaccaaggactttatcttacactgattgcaatatttga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttttttaggaccccggtttgataaccaaggactttatcttacactgattgcaatatttga 406

               
Query: 360 catg 363
           ||||
Sbjct: 407 catg 410