Miyakogusa Predicted Gene
- Lj0g3v0087839.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0087839.2 tr|Q9W0I7|Q9W0I7_DROME IP07275p OS=Drosophila
melanogaster GN=Psf1 PE=2 SV=2,32.38,3e-19,PARTNER OF SLD5,NULL;
PARTNER OF SLD5,GINS complex, subunit Psf1; Sld5,GINS
complex,CUFF.4694.2
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66058 similar to UniRef100_A7P7T6 Cluster: Chromosome... 1179 0.0
gnl|LJGI|TC63630 similar to UniRef100_A7P7T6 Cluster: Chromosome... 989 0.0
>gnl|LJGI|TC66058 similar to UniRef100_A7P7T6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 863
Score = 1179 bits (595), Expect = 0.0
Identities = 601/603 (99%)
Strand = Plus / Plus
Query: 1 atgtatgggagaaaagcttgccaacttgtcaaagaactcgctggcggagaaaagggccag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atgtatgggagaaaatcttgccaacttgtcaaagaactcgctggcggagaaaagggccag 146
Query: 61 ttcacgccgtttaatagtgacttgtttgaacaagtagtggcagagtgcagtcaacatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttcacgccgtttaatagtgacttgtttgaacaagtagtggcagagtgcagtcaacatcac 206
Query: 121 cttgagcttcagtccttaataaggaagatacaggacgaaggtttggatgtccaaacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cttgagcttcagtccttaataaggaagatacaggacgaaggtttggatgtccaaacagct 266
Query: 181 agaaatgcagaccactacggagccctcatccaccatctttctttagtccgaaataaacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agaaatgcagaccactacggagccctcatccaccatctttctttagtccgaaataaacgt 326
Query: 241 tgcctaatggcctatacgtacaatcgagcagaaaatttacggagcttggtatggaaggta 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgcctaacggcctatacgtacaatcgagcagaaaatttacggagcttggtatggaaggta 386
Query: 301 ggacatgggcttcctcaggaaattgaagaaaagatttgtcattcagagaaggaatatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggacatgggcttcctcaggaaattgaagaaaagatttgtcattcagagaaggaatatttt 446
Query: 361 aagaagcattcttctgcattgaaatcttatatgtcacaactgctggttgatctcactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aagaagcattcttctgcattgaaatcttatatgtcacaactgctggttgatctcactgtg 506
Query: 421 gatatggtacctccaaaagatccttgcatccaagtaagggtccttgaagacataggagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gatatggtacctccaaaagatccttgcatccaagtaagggtccttgaagacataggagaa 566
Query: 481 ggcattgtacttagtgatgataagacttacaatttggccttacaatcaatacaccttctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggcattgtacttagtgatgataagacttacaatttggccttacaatcaatacaccttctg 626
Query: 541 aaacgaactgatgcagagcaatttatcgcaaggggcttaatggaggagatcacggattga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaacgaactgatgcagagcaatttatcgcaaggggcttaatggaggagatcacggattga 686
Query: 601 cct 603
|||
Sbjct: 687 cct 689
>gnl|LJGI|TC63630 similar to UniRef100_A7P7T6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 840
Score = 989 bits (499), Expect = 0.0
Identities = 513/515 (99%), Gaps = 2/515 (0%)
Strand = Plus / Plus
Query: 1 atgtatgggagaaaagcttgccaacttgtcaaagaactcgctggcggagaaaagggccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atgtatgggagaaaagcttgccaacttgtcaaagaactcgctggcggagaaaagggccag 337
Query: 61 ttcacgccgtttaatagtgacttgtttgaacaagtagtggcagagtgcagtcaacatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttcacgccgtttaatagtgacttgtttgaacaagtagtggcagagtgcagtcaacatcac 397
Query: 121 cttgagcttcagtccttaataaggaagatacaggacgaaggtttggatgtccaaacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cttgagcttcagtccttaataaggaagatacaggacgaaggtttggatgtccaaacagct 457
Query: 181 agaaatgcagaccactacggagccctcatccaccatctttctttagtccgaaataaacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agaaatgcagaccactacggagccctcatccaccatctttctttagtccgaaataaacgt 517
Query: 241 tgcctaatggcctatacgtacaatcgagcagaaaatttacggagcttggtatggaaggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgcctaatggcctatacgtacaatcgagcagaaaatttacggagcttggtatggaaggta 577
Query: 301 ggacatgggcttcctcaggaaattgaagaaaagatttgtcattcagagaaggaatatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ggacatgggcttcctcaggaaattgaagaaaagatttgtcattcagagaaggaatatttt 637
Query: 361 aagaagcattcttctgcattgaaatcttatatgtcacaactgctggttgatctcactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aagaagcattcttctgcattgaaatcttatatgtcacaactgctggttgatctcactgtg 697
Query: 421 gatatggtacctccaaaagatccttgcatccaagtaagggtccttgaagacataggagaa 480
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 698 gatatggtacctccaaaagatccttgcatccaagtaa-ggtccttgaagacataggag-a 755
Query: 481 ggcattgtacttagtgatgataagacttacaattt 515
|||||||||||||||||||||||||||||||||||
Sbjct: 756 ggcattgtacttagtgatgataagacttacaattt 790
Score = 54.0 bits (27), Expect = 1e-06
Identities = 41/43 (95%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 559 caatttatcgcaaggggcttaatggaggagatcacggattgac 601
||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 785 caatttatcgcaa-gggcttaatgga-gagatcacggattgac 825