Miyakogusa Predicted Gene

Lj0g3v0087829.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087829.1 Non Chatacterized Hit- tr|F6HVB5|F6HVB5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.18,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; THO
COMPLEX SUBUNIT 1,NULL; efThoc1,THO comple,CUFF.4693.1
         (1719 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67260 similar to UniRef100_A7QMC6 Cluster: Chromosome...  1009   0.0  

>gnl|LJGI|TC67260 similar to UniRef100_A7QMC6 Cluster: Chromosome undetermined
            scaffold_125, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_125, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (18%)
          Length = 861

 Score = 1009 bits (509), Expect = 0.0
 Identities = 509/509 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1211 ggaagtgggcagatcaaaatccgaatgctttaactgatcctcagcgtgttcaaacacctt 1270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggaagtgggcagatcaaaatccgaatgctttaactgatcctcagcgtgttcaaacacctt 60

                                                                        
Query: 1271 tgattatggagtactggaaacccttagcggaagatatggatcctgctgctggaatagaag 1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgattatggagtactggaaacccttagcggaagatatggatcctgctgctggaatagaag 120

                                                                        
Query: 1331 ctgaatatcaccacaagaataacagggtttattgttggaaaggtcttcggctttctgcac 1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctgaatatcaccacaagaataacagggtttattgttggaaaggtcttcggctttctgcac 180

                                                                        
Query: 1391 gacaggacttggagggattttctaagtttactgataatggcattgaaggagttgtaccac 1450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gacaggacttggagggattttctaagtttactgataatggcattgaaggagttgtaccac 240

                                                                        
Query: 1451 tagaacttttgccatctgatgtccgaactaaattccaatctaaatctaatgacagaggta 1510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tagaacttttgccatctgatgtccgaactaaattccaatctaaatctaatgacagaggta 300

                                                                        
Query: 1511 aacgtgctaaaaaggaagaagcaaaaggcgctgcccatcaagttgaggaaaatcaggttg 1570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aacgtgctaaaaaggaagaagcaaaaggcgctgcccatcaagttgaggaaaatcaggttg 360

                                                                        
Query: 1571 ctacacctgcaactgagaacgatggtgaaggcattagaacagatgccgcagcaacgccta 1630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctacacctgcaactgagaacgatggtgaaggcattagaacagatgccgcagcaacgccta 420

                                                                        
Query: 1631 tggaatttgatgccgcaactgtccctgacttacaaggtggaaccccaacacctgaagaac 1690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tggaatttgatgccgcaactgtccctgacttacaaggtggaaccccaacacctgaagaac 480

                                         
Query: 1691 ttcagaagcagaactcagaccctgatggt 1719
            |||||||||||||||||||||||||||||
Sbjct: 481  ttcagaagcagaactcagaccctgatggt 509