Miyakogusa Predicted Gene

Lj0g3v0087809.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087809.1 Non Chatacterized Hit- tr|A5B7J1|A5B7J1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.23,0,OS03G0848700 PROTEIN,NULL; LEUCINE-RICH REPEAT-CONTAINING
PROTEIN,NULL; NB-ARC,NB-ARC; LRR_1,Leucine,CUFF.4691.1
         (3803 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80518 weakly similar to UniRef100_A7Q1Z5 Cluster: Chr...   650   0.0  
gnl|LJGI|BP067300 similar to UniRef100_A7QLL3 Cluster: Chromosom...   456   e-127
gnl|LJGI|AV767410 weakly similar to UniRef100_A7Q221 Cluster: Ch...   170   4e-41

>gnl|LJGI|TC80518 weakly similar to UniRef100_A7Q1Z5 Cluster: Chromosome chr13
            scaffold_45, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 328

 Score =  650 bits (328), Expect = 0.0
 Identities = 328/328 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3112 cagaatttggagtctcttgtagtcaccggggtgcagttgcaatatcttcaatctctgaat 3171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cagaatttggagtctcttgtagtcaccggggtgcagttgcaatatcttcaatctctgaat 60

                                                                        
Query: 3172 tccttaaggatctgcaattgtcctaactttgaatcttttcctgaaggtggactcagagct 3231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tccttaaggatctgcaattgtcctaactttgaatcttttcctgaaggtggactcagagct 120

                                                                        
Query: 3232 ccaaatatgacaaatttacatttggaaaaatgtaaaaaattgaagtcttttccgcagcag 3291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ccaaatatgacaaatttacatttggaaaaatgtaaaaaattgaagtcttttccgcagcag 180

                                                                        
Query: 3292 atgaacaagatgctcctgtccctcatgactttgaacataaaagagtgtccagaacttgag 3351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atgaacaagatgctcctgtccctcatgactttgaacataaaagagtgtccagaacttgag 240

                                                                        
Query: 3352 tcaattccagagggaggttttccagatagtctgaacttacttgagatctttcactgtgct 3411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tcaattccagagggaggttttccagatagtctgaacttacttgagatctttcactgtgct 300

                                        
Query: 3412 aaactatttaccaacaggaagaactggg 3439
            ||||||||||||||||||||||||||||
Sbjct: 301  aaactatttaccaacaggaagaactggg 328


>gnl|LJGI|BP067300 similar to UniRef100_A7QLL3 Cluster: Chromosome chr13 scaffold_120,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_120, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 523

 Score =  456 bits (230), Expect = e-127
 Identities = 233/234 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3570 gaagtatctagatgaggacagccttcaaaaattgacctctctagagactttggggattgc 3629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523  gaagtatctagatgaggacagccttcaaaaattgacctctctagagactttggggattgc 464

                                                                        
Query: 3630 atgctgcccaaaacttcagtgtatgcctgcaaagcttccttgttcgatttctacccttca 3689
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 463  atgctgcccaaaacttcagtgtatgcctgctaagcttccttgttcgatttctacccttca 404

                                                                        
Query: 3690 tatcgtgagaagtccaagacttgaagaaagatgtagaggaaggaaatctgaagattggcc 3749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403  tatcgtgagaagtccaagacttgaagaaagatgtagaggaaggaaatctgaagattggcc 344

                                                                  
Query: 3750 caaaattgctcacattcccatgatacggatcaacaggaaattgctccaataaga 3803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343  caaaattgctcacattcccatgatacggatcaacaggaaattgctccaataaga 290


>gnl|LJGI|AV767410 weakly similar to UniRef100_A7Q221 Cluster: Chromosome chr13
            scaffold_45  whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep:, partial (1%)
          Length = 315

 Score =  170 bits (86), Expect = 4e-41
 Identities = 89/90 (98%)
 Strand = Plus / Minus

                                                                        
Query: 3712 gaagaaagatgtagaggaaggaaatctgaagattggcccaaaattgctcacattcccatg 3771
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 315  gaagaaagatgtagaggaaggaaatttgaagattggcccaaaattgctcacattcccatg 256

                                          
Query: 3772 atacggatcaacaggaaattgctccaataa 3801
            ||||||||||||||||||||||||||||||
Sbjct: 255  atacggatcaacaggaaattgctccaataa 226