Miyakogusa Predicted Gene
- Lj0g3v0087739.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0087739.1 tr|Q0DLF3|Q0DLF3_ORYSJ Os05g0104900 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os05g01049,76.79,1e-18,U-box,U box domain; no description,Zinc
finger, RING/FYVE/PHD-type; PUTATIVE UNCHARACTERIZED
PROTEIN,CUFF.4688.1
(420 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66347 weakly similar to UniRef100_A9TJJ9 Cluster: Pre... 813 0.0
gnl|LJGI|TC68571 similar to UniRef100_A7R6T2 Cluster: Chromosome... 343 5e-94
>gnl|LJGI|TC66347 weakly similar to UniRef100_A9TJJ9 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(66%)
Length = 996
Score = 813 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1 atggtagaagagatatggcaagagcttgcgaaagcaaaataccaagagtgggagcgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atggtagaagagatatggcaagagcttgcgaaagcaaaataccaagagtgggagcgttca 646
Query: 61 tcgaccaagcgatcgtgggaattgcagagtttgaaacaagcatgtgagtctgcactaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tcgaccaagcgatcgtgggaattgcagagtttgaaacaagcatgtgagtctgcactaaag 706
Query: 121 gaaaaacattttcttgatggctctgatatggaaggatttgtagatgatgctactactact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaaaaacattttcttgatggctctgatatggaaggatttgtagatgatgctactactact 766
Query: 181 catttgaagcaattagaggctttagaaggagtcttcaataaagctgctgaggctgacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 catttgaagcaattagaggctttagaaggagtcttcaataaagctgctgaggctgacata 826
Query: 241 cctgctgaggtcccagattacttatgctgtaaaatcacccttgacatttttcatgatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 cctgctgaggtcccagattacttatgctgtaaaatcacccttgacatttttcatgatcct 886
Query: 301 gtaatcactccaagtggacttacatatgagagggcagtgattcttgaccatcttcagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gtaatcactccaagtggacttacatatgagagggcagtgattcttgaccatcttcagaag 946
Query: 361 gttggtagatttgacccggtcacgagggaaccacttgatccatcacagct 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 gttggtagatttgacccggtcacgagggaaccacttgatccatcacagct 996
>gnl|LJGI|TC68571 similar to UniRef100_A7R6T2 Cluster: Chromosome undetermined
scaffold_1410, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1410,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 1065
Score = 343 bits (173), Expect = 5e-94
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 248 aggtcccagattacttatgctgtaaaatcacccttgacatttttcatgatcctgtaatca 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aggtcccagattacttatgctgtaaaatcacccttgacatttttcatgatcctgtaatca 655
Query: 308 ctccaagtggacttacatatgagagggcagtgattcttgaccatcttcagaaggttggta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctccaagtggacttacatatgagagggcagtgattcttgaccatcttcagaaggttggta 715
Query: 368 gatttgacccggtcacgagggaaccacttgatccatcacagctagtaccgaac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gatttgacccggtcacgagggaaccacttgatccatcacagctagtaccgaac 768
Score = 301 bits (152), Expect = 2e-81
Identities = 155/156 (99%)
Strand = Plus / Plus
Query: 96 acaagcatgtgagtctgcactaaaggaaaaacattttcttgatggctctgatatggaagg 155
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 acaagcatgtgagtctgcactaaaggaaaaacattttcttgatggctctgacatggaagg 420
Query: 156 atttgtagatgatgctactactactcatttgaagcaattagaggctttagaaggagtctt 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttgtagatgatgctactactactcatttgaagcaattagaggctttagaaggagtctt 480
Query: 216 caataaagctgctgaggctgacatacctgctgaggt 251
||||||||||||||||||||||||||||||||||||
Sbjct: 481 caataaagctgctgaggctgacatacctgctgaggt 516
Score = 188 bits (95), Expect = 2e-47
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 atggtagaagagatatggcaagagcttgcgaaagcaaaataccaagagtgggagcgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggtagaagagatatggcaagagcttgcgaaagcaaaataccaagagtgggagcgttca 130
Query: 61 tcgaccaagcgatcgtgggaattgcagagtttgaa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 131 tcgaccaagcgatcgtgggaattgcagagtttgaa 165