Miyakogusa Predicted Gene

Lj0g3v0087729.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087729.1 Non Chatacterized Hit- tr|K4CAH0|K4CAH0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,75.86,5e-19,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain; PUTATIVE
UNCHAR,CUFF.4687.1
         (180 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66347 weakly similar to UniRef100_A9TJJ9 Cluster: Pre...   349   4e-96

>gnl|LJGI|TC66347 weakly similar to UniRef100_A9TJJ9 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (66%)
          Length = 996

 Score =  349 bits (176), Expect = 4e-96
 Identities = 176/176 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggccaaacgctacggcggcgaaacaagcggagcagcttagaatagacggcaacagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atggggccaaacgctacggcggcgaaacaagcggagcagcttagaatagacggcaacagt 295

                                                                       
Query: 61  tacttcaagaaagaccgtttcggtgccgcgatcgatgcttacaccgaggctatcacgctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tacttcaagaaagaccgtttcggtgccgcgatcgatgcttacaccgaggctatcacgctc 355

                                                                   
Query: 121 tgtcccaatgttccggtttattggaccaatcgtgctctttgccatctcaaacgcaa 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgtcccaatgttccggtttattggaccaatcgtgctctttgccatctcaaacgcaa 411