Miyakogusa Predicted Gene

Lj0g3v0087709.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087709.1 CUFF.4683.1
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80597                                                      161   4e-39
gnl|LJGI|CB828858 similar to UniRef100_A0W4T8 Cluster: Multi-sen...    84   8e-16

>gnl|LJGI|TC80597 
          Length = 751

 Score =  161 bits (81), Expect = 4e-39
 Identities = 148/170 (87%), Gaps = 4/170 (2%)
 Strand = Plus / Plus

                                                                       
Query: 259 caacacagctcagcctttctcaaccatctccatcatctcacatcatcaatacagcccaga 318
           ||||||||||||||| ||||||||||||||  ||||||| ||||||||| ||| |||| |
Sbjct: 134 caacacagctcagccattctcaaccatctctgtcatctcgcatcatcaacacaacccaaa 193

                                                                       
Query: 319 gaactattcatgaggtggtttaggtttttatatccttcttcacgtctccttcatctccct 378
           ||||| |||||| ||||| |||||||||||| ||||||| |||| | |||||||||||||
Sbjct: 194 gaactgttcatgtggtgggttaggtttttatttccttctgcacgccaccttcatctccct 253

                                                             
Query: 379 ggcaccgccggttcatcaaccttggtgacgaagattagcatcatcttctt 428
           ||||||||||    ||||||| |||||||| ||| |||||||||| ||||
Sbjct: 254 ggcaccgccg----atcaaccatggtgacggagaatagcatcatcatctt 299



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 152 caacacagctcagcctttctcaaccatctccgtcatctcacatcatcaac 201
           ||||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 134 caacacagctcagccattctcaaccatctctgtcatctcgcatcatcaac 183



 Score = 67.9 bits (34), Expect = 5e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 45  caacacagctcagttgttctcaatcatctctgtcatctcgcatcatcaac 94
           |||||||||||||   ||||||| ||||||||||||||||||||||||||
Sbjct: 134 caacacagctcagccattctcaaccatctctgtcatctcgcatcatcaac 183


>gnl|LJGI|CB828858 similar to UniRef100_A0W4T8 Cluster: Multi-sensor hybrid histidine
           kinase precursor; n=1; Geobacter lovleyi SZ|Rep:,
           partial (1%)
          Length = 502

 Score = 83.8 bits (42), Expect = 8e-16
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 230 gtcatctcgctttcaacccatcta-cacggcaacacagctcagcctttctcaaccatctc 288
           |||||||||||| ||||||||| | |||||||||||| |||||||||||| |||||||| 
Sbjct: 5   gtcatctcgcttccaacccatccaacacggcaacacaactcagcctttctgaaccatctt 64

                             
Query: 289 catcatctcacatcatca 306
           | ||||||| ||||||||
Sbjct: 65  cgtcatctcgcatcatca 82



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 146 acacggcaacacagctcagcctttctcaaccatctccgtcatctcacatcatca 199
           ||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 29  acacggcaacacaactcagcctttctgaaccatcttcgtcatctcgcatcatca 82



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                      
Query: 30 acccatccaacacggcaacacagctcagttgttctcaatcatctctgtcatctcgcatca 89
          |||||||||||||||||||||| |||||   |||| || |||||  ||||||||||||||
Sbjct: 20 acccatccaacacggcaacacaactcagcctttctgaaccatcttcgtcatctcgcatca 79

             
Query: 90 tca 92
          |||
Sbjct: 80 tca 82