Miyakogusa Predicted Gene
- Lj0g3v0087609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0087609.1 Non Chatacterized Hit- tr|I1MF73|I1MF73_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33301
PE,85.66,0,SUPERTUBBY,Tubby, C-terminal; TUBBY PROTEIN-RELATED,NULL;
TUBBY-RELATED,NULL; no description,NULL; n,CUFF.4679.1
(855 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 1459 0.0
gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 1229 0.0
gnl|LJGI|BW627702 homologue to UniRef100_UPI0000F32A27 Cluster: ... 172 2e-42
gnl|LJGI|TC79613 similar to UniRef100_Q9M3H9 Cluster: Tubby-like... 66 4e-10
gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 60 2e-08
>gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1;
Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (85%)
Length = 2052
Score = 1459 bits (736), Expect = 0.0
Identities = 826/855 (96%), Gaps = 2/855 (0%)
Strand = Plus / Plus
Query: 1 atgagatcgaggtctcagagggtggtggtggaggaggagtctgcggcggtggaggtggtc 60
|||||||||||||| ||||||||||||||||||||||| | ||||||| || |||||||
Sbjct: 452 atgagatcgaggtcgcagagggtggtggtggaggaggacgcggcggcggcggtggtggtc 511
Query: 61 ggtgatgggttgaggcagagctgttgggctaacatgccgcaggagcttctccgtgaggtg 120
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggcgatgggttgaggcagagctgctgggctaacatgccgcaggagcttctccgtgaggtg 571
Query: 121 cttctccgaatcgaggcgtcggaggagaagtggccggcgaggaagagtgtggtggcgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cttctccgaatcgaggcgtcggaggagaagtggccggcgaggaagagtgtggtggcgtgt 631
Query: 181 gccggagtttgccggagctggagggagatcaccaaggacatcgttaagaaacctgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gccggagtttgccggagctggagggagatcaccaaggacatcgttaagaaacctgaattt 691
Query: 241 tcatccaagttaaccttccccatctctgttaagcagcctggtccaagggaaaatctcctc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 692 tcatccaagttaaccttccccatctctgttaagcagcctggtccaagggagaatctcctc 751
Query: 301 cagtgctttataagccgcaaccggaccactcaaacatattatttgtatctcaatttaact 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 752 cagtgctttataagccgcaaccggaccacccaaacatattatttgtatctcaatttaact 811
Query: 361 agtgcactatgtgatgatggaaagttccttcttgctgcacgcaaatgcaggcgtcccacc 420
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 812 agtgcactatgtgatgatggaaagttccttctcgctgcacgcaaatgcagacgtcccacc 871
Query: 421 tgcacagattatataatgtctttacatgcagatgatatgtcaaggggaagcaacacctat 480
|||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 872 tgcacagattatatcatctctttacatgcagatgatatgtcaaggggaagcaacgcctat 931
Query: 481 gttgggaaactcagatcaaattttctgggaaccaagttcacaatctatgatggccagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gttgggaaactcagatcaaattttctgggaaccaagttcacaatctatgatggccagcca 991
Query: 541 cctcatgcaggggcaaagattacaaaaagtcgctccactaggctggtgaatctaaaacaa 600
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 992 cctcatgctggggcaaagattacaaaaagtcgctcgactagactggtgaatctaaaacaa 1051
Query: 601 gtttcacccaaggtcccaacaggaaactatccaatagctcacatctcatacgaattgaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 gtttcacccaaggtcccaacaggaaactatccaatagctcacatctcatacgaattgaat 1111
Query: 661 gtgctaggttccagggggcctaggcgaatgcactgtgtcatggattccattccgacctct 720
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1112 gtgctaggttccagggggcctaggcgaatgcattgtgtcatggattccattccgacctct 1171
Query: 721 gcaattgaaccaggaggggtagcccctacacagaccgaattttctcttaacaacgtagat 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1172 gcaattgaaccaggaggggtagcccctacacagaccgagttttctcttaacaacgtagat 1231
Query: 781 atgttcccctcattcccctttttcagatcaaagtcaagtcgtgccgaaaa--ctttgtct 838
||||||||||||||||| |||||| | || |||||||||||||| ||||| |||| |||
Sbjct: 1232 atgttcccctcattcccatttttccggtcgaagtcaagtcgtgctgaaaactctttatct 1291
Query: 839 ggacctctggctgat 853
|||||| ||||||||
Sbjct: 1292 ggacctttggctgat 1306
>gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3;
n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein
3 - Arabidopsis thaliana (Mouse-ear cress), partial
(47%)
Length = 962
Score = 1229 bits (620), Expect = 0.0
Identities = 659/672 (98%)
Strand = Plus / Plus
Query: 1 atgagatcgaggtctcagagggtggtggtggaggaggagtctgcggcggtggaggtggtc 60
|||||||||||||| ||||||||||||||||||||||| | ||||||| || |||||||
Sbjct: 291 atgagatcgaggtcgcagagggtggtggtggaggaggacgcggcggcggcggtggtggtc 350
Query: 61 ggtgatgggttgaggcagagctgttgggctaacatgccgcaggagcttctccgtgaggtg 120
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggcgatgggttgaggcagagctgctgggctaacatgccgcaggagcttctccgtgaggtg 410
Query: 121 cttctccgaatcgaggcgtcggaggagaagtggccggcgaggaagagtgtggtggcgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cttctccgaatcgaggcgtcggaggagaagtggccggcgaggaagagtgtggtggcgtgt 470
Query: 181 gccggagtttgccggagctggagggagatcaccaaggacatcgttaagaaacctgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gccggagtttgccggagctggagggagatcaccaaggacatcgttaagaaacctgaattt 530
Query: 241 tcatccaagttaaccttccccatctctgttaagcagcctggtccaagggaaaatctcctc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 531 tcatccaagttaaccttccccatctctgttaagcagcctggtccaagggagaatctcctc 590
Query: 301 cagtgctttataagccgcaaccggaccactcaaacatattatttgtatctcaatttaact 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 591 cagtgctttataagccgcaaccggaccacccaaacatattatttgtatctcaatttaact 650
Query: 361 agtgcactatgtgatgatggaaagttccttcttgctgcacgcaaatgcaggcgtcccacc 420
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 651 agtgcactatgtgatgatggaaagttccttctcgctgcacgcaaatgcagacgtcccacc 710
Query: 421 tgcacagattatataatgtctttacatgcagatgatatgtcaaggggaagcaacacctat 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgcacagattatataatctctttacatgcagatgatatgtcaaggggaagcaacacctat 770
Query: 481 gttgggaaactcagatcaaattttctgggaaccaagttcacaatctatgatggccagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gttgggaaactcagatcaaattttctgggaaccaagttcacaatctatgatggccagcca 830
Query: 541 cctcatgcaggggcaaagattacaaaaagtcgctccactaggctggtgaatctaaaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 cctcatgcaggggcaaagattacaaaaagtcgctccactaggctggtgaatctaaaacaa 890
Query: 601 gtttcacccaaggtcccaacaggaaactatccaatagctcacatctcatacgaattgaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gtttcacccaaggtcccaacaggaaactatccaatagctcacatctcatacgaattgaat 950
Query: 661 gtgctaggttcc 672
||||||||||||
Sbjct: 951 gtgctaggttcc 962
>gnl|LJGI|BW627702 homologue to UniRef100_UPI0000F32A27 Cluster: Ankyrin repeat
domain-containing protein 43.; n=1; Bos taurus|Rep:
Ankyrin repeat domain-containing protein 43. - Bos
Taurus, partial (5%)
Length = 481
Score = 172 bits (87), Expect = 2e-42
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 1 atgagatcgaggtctcagagggtggtggtggaggaggagtctgcggcggtggaggtggtc 60
|||||||||||||| ||||||||||||||||||||||| | ||||||| || |||||||
Sbjct: 363 atgagatcgaggtcgcagagggtggtggtggaggaggacgcggcggcggcggtggtggtc 422
Query: 61 ggtgatgggttgaggcagagctgttgggctaacatgccgcaggagcttctccgtgaggt 119
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 423 ggcgatgggttgaggcagagctgctgggctaacatgccgcaggagcttctccgtgaggt 481
>gnl|LJGI|TC79613 similar to UniRef100_Q9M3H9 Cluster: Tubby-like protein; n=1; Cicer
arietinum|Rep: Tubby-like protein - Cicer arietinum
(Chickpea) (Garbanzo), partial (57%)
Length = 1071
Score = 65.9 bits (33), Expect = 4e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 469 agcaacacctatgttgggaaactcagatcaaattttctgggaaccaagttcac 521
|||||||| ||| ||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 83 agcaacacatatattgggaaactcaggtcaaactttttgggaaccaagttcac 135
>gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3;
n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein
3 - Arabidopsis thaliana (Mouse-ear cress), partial
(87%)
Length = 1640
Score = 60.0 bits (30), Expect = 2e-08
Identities = 120/150 (80%)
Strand = Plus / Plus
Query: 54 ggtggtcggtgatgggttgaggcagagctgttgggctaacatgccgcaggagcttctccg 113
|||||| | ||||||||||| |||||| ||||||||||||||||| | |||||||| |
Sbjct: 245 ggtggttgatgatgggttgaagcagagttgttgggctaacatgccaccagagcttctgag 304
Query: 114 tgaggtgcttctccgaatcgaggcgtcggaggagaagtggccggcgaggaagagtgtggt 173
|| ||||| | | || || || || ||| | || ||||| || ||||| ||||||
Sbjct: 305 agatgtgctcatgaggattgaagcctctgagcataattggcctgcccggaagcatgtggt 364
Query: 174 ggcgtgtgccggagtttgccggagctggag 203
||| |||||||| |||||||||||||||||
Sbjct: 365 ggcctgtgccggcgtttgccggagctggag 394