Miyakogusa Predicted Gene
- Lj0g3v0087579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0087579.1 Non Chatacterized Hit- tr|I1KDQ3|I1KDQ3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,52.73,4e-18,seg,NULL;
DUF3082,Protein of unknown function DUF3082,CUFF.4676.1
(888 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69094 similar to UniRef100_A7P1U3 Cluster: Chromosome... 1568 0.0
gnl|LJGI|TC59816 773 0.0
gnl|LJGI|TC65484 similar to UniRef100_A7P1U3 Cluster: Chromosome... 68 1e-10
>gnl|LJGI|TC69094 similar to UniRef100_A7P1U3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1106
Score = 1568 bits (791), Expect = 0.0
Identities = 791/791 (100%)
Strand = Plus / Plus
Query: 98 cttttctctacaaacccacttcttctattctccaccactctgtttcagtttctgccattc 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cttttctctacaaacccacttcttctattctccaccactctgtttcagtttctgccattc 179
Query: 158 ctccctcaagttcttcttggacatggctgacccacctcgccgcagagctcagcacctcga 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctccctcaagttcttcttggacatggctgacccacctcgccgcagagctcagcacctcga 239
Query: 218 tagacttagacgcagagggagagggccccatcgaaatcccgtttccttcaacaccttcca 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tagacttagacgcagagggagagggccccatcgaaatcccgtttccttcaacaccttcca 299
Query: 278 ttttcgatgccaccgacgacccttctcccatccaagtcgcttccagcgtgctcctcaccg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttttcgatgccaccgacgacccttctcccatccaagtcgcttccagcgtgctcctcaccg 359
Query: 338 gtgccatctccgtcttcctcttccgctccctccgtcgcagggctaaacgtgtcaaagaat 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtgccatctccgtcttcctcttccgctccctccgtcgcagggctaaacgtgtcaaagaat 419
Query: 398 cgcaattcaggtcttctggagttgtgaagaagtccattcaggaagaagctctggatagct 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgcaattcaggtcttctggagttgtgaagaagtccattcaggaagaagctctggatagct 479
Query: 458 tgaaagctctcgggtcagcttcaattgatgctaagggtcctccttcaccttttcagacat 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgaaagctctcgggtcagcttcaattgatgctaagggtcctccttcaccttttcagacat 539
Query: 518 ttcttgggggaatatccgcaggaattattgctcttattttctacaagtttgccactacaa 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttcttgggggaatatccgcaggaattattgctcttattttctacaagtttgccactacaa 599
Query: 578 ttgaagcatctctaaacaaacaaacaatttcagacaatttctctgtccgccagataacaa 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttgaagcatctctaaacaaacaaacaatttcagacaatttctctgtccgccagataacaa 659
Query: 638 tcgccataaggacatttgtgaatggcttgacgtacctggcgacctttattttcggcctaa 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcgccataaggacatttgtgaatggcttgacgtacctggcgacctttattttcggcctaa 719
Query: 698 attcccttggtttatttctttattccggccagcttgccatcaaatccattgcgggtggtt 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 attcccttggtttatttctttattccggccagcttgccatcaaatccattgcgggtggtt 779
Query: 758 caactgaaaaggaaactgaaagcaaaagcgttgatcagtcaagtttatcaaattcactgg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 caactgaaaaggaaactgaaagcaaaagcgttgatcagtcaagtttatcaaattcactgg 839
Query: 818 atgagagtcccgcaaataacactgagctgagcagcagaaaggaagaacaaagttcaaatg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atgagagtcccgcaaataacactgagctgagcagcagaaaggaagaacaaagttcaaatg 899
Query: 878 atgcacaatag 888
|||||||||||
Sbjct: 900 atgcacaatag 910
>gnl|LJGI|TC59816
Length = 2331
Score = 773 bits (390), Expect = 0.0
Identities = 403/407 (99%), Gaps = 4/407 (0%)
Strand = Plus / Plus
Query: 482 ttgatgctaagggtcctccttcaccttttcagacatttcttgggggaatatccgcaggaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 ttgatgctaagggtcctccttcaccttttcagacatttcttgggggaatatccgcaggaa 1833
Query: 542 ttattgctcttattttctacaagtttgccactacaattgaagcatctctaaacaaacaaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1834 ttattgctcttattttctacaagtttgccactacaattgaagcatctctaaac----aaa 1889
Query: 602 caatttcagacaatttctctgtccgccagataacaatcgccataaggacatttgtgaatg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1890 caatttcagacaatttctctgtccgccagataacaatcgccataaggacatttgtgaatg 1949
Query: 662 gcttgacgtacctggcgacctttattttcggcctaaattcccttggtttatttctttatt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 gcttgacgtacctggcgacctttattttcggcctaaattcccttggtttatttctttatt 2009
Query: 722 ccggccagcttgccatcaaatccattgcgggtggttcaactgaaaaggaaactgaaagca 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 ccggccagcttgccatcaaatccattgcgggtggttcaactgaaaaggaaactgaaagca 2069
Query: 782 aaagcgttgatcagtcaagtttatcaaattcactggatgagagtcccgcaaataacactg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2070 aaagcgttgatcagtcaagtttatcaaattcactggatgagagtcccgcaaataacactg 2129
Query: 842 agctgagcagcagaaaggaagaacaaagttcaaatgatgcacaatag 888
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 agctgagcagcagaaaggaagaacaaagttcaaatgatgcacaatag 2176
>gnl|LJGI|TC65484 similar to UniRef100_A7P1U3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 921
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 598 caaacaatttcagacaatttctctgtccgccagataacaatcgccataaggaca 651
|||||||||||||| |||||||| ||||||||| | |||||| |||||||||||
Sbjct: 564 caaacaatttcagataatttctcggtccgccaggtcacaatcaccataaggaca 617