Miyakogusa Predicted Gene
- Lj0g3v0087309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0087309.1 Non Chatacterized Hit- tr|I3S3Z9|I3S3Z9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,57.14,7e-19,FAMILY NOT NAMED,NULL; FBD,FBD; domain in FBox and
BRCT domain containing pl,FBD,CUFF.4652.1
(331 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-li... 155 2e-37
gnl|LJGI|FS355536 149 1e-35
gnl|LJGI|TC69848 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 115 2e-25
gnl|LJGI|GO015698 weakly similar to UniRef100_A2Q1U7 Cluster: Cy... 111 3e-24
gnl|LJGI|BW596571 weakly similar to UniRef100_A2Q1U7 Cluster: Cy... 111 3e-24
gnl|LJGI|TC65375 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 111 3e-24
gnl|LJGI|TC60064 84 6e-16
gnl|LJGI|TC64714 similar to UniRef100_Q2HUK1 Cluster: FBD; n=1; ... 80 1e-14
gnl|LJGI|TC74716 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 66 1e-10
gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome... 60 9e-09
gnl|LJGI|FS343807 52 2e-06
>gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD; Zinc
finger FYVE/PHD-type; n=1; Medicago truncatula|Rep:,
partial (2%)
Length = 498
Score = 155 bits (78), Expect = 2e-37
Identities = 222/270 (82%)
Strand = Plus / Plus
Query: 25 atgctcaagcagtgccctaagcttcaaaattttggccttaatatggagttgatgtctgct 84
||||||||| ||||||| |||||||||| ||||| ||| ||||| || | | ||||||
Sbjct: 130 atgctcaagaagtgcccgaagcttcaaatttttgtcctagatatgcagataagttctgct 189
Query: 85 aatctggtttggatttcccccaaatttgttcctgaatgcctttcttcacagcttagaaag 144
|| || ||||||| ||||| | ||||||||||||| |||||||||||||||| |||
Sbjct: 190 catgtgatttggatatccccttatcttgttcctgaatgtatttcttcacagcttaggaag 249
Query: 145 tgttctattacaaattatgatagcacgagatttcagctgcattttgcaaaatatatcatg 204
||||||||||| |||||| |||| | | | ||| |||||||||||||||||| |||
Sbjct: 250 tgttctattactaattatagcggcacaaaaagtgagcagcattttgcaaaatatatgatg 309
Query: 205 cagaattcaagggttttacagacaatgaccatatacaccgcgccttcctcatcgttacaa 264
||||||||||| |||||||||||||||||||||| ||| ||| |||||| || ||
Sbjct: 310 cagaattcaagagttttacagacaatgaccatatgcactccgcgttcctcgaaattgcag 369
Query: 265 aagaaatttgaaatgctaaaagaactgtcc 294
| ||||||||||||||||||||| |||||
Sbjct: 370 gacaaatttgaaatgctaaaagaattgtcc 399
>gnl|LJGI|FS355536
Length = 711
Score = 149 bits (75), Expect = 1e-35
Identities = 190/228 (83%), Gaps = 9/228 (3%)
Strand = Plus / Minus
Query: 15 ggtacttacaatgctcaagcagtgccctaagcttcaaaattttggccttaatatggag-- 72
||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||| |
Sbjct: 468 ggtacttgcaatgctcaagcagtgccctatgcttcaaaattttgtccttgatatgcggaa 409
Query: 73 -----ttgatg--tctgctaatctggtttggatttcccccaaatttgttcctgaatgcct 125
|||||| |||| | || ||||||||| ||||||| |||||||||||||||||
Sbjct: 408 aagttttgatgattctgatgatttggtttggacttccccctgttttgttcctgaatgcct 349
Query: 126 ttcttcacagcttagaaagtgttctattacaaattatgatagcacgagatttcagctgca 185
|||||||||||||||||| |||||||||| ||||| ||| |||| | | |||| |
Sbjct: 348 ttcttcacagcttagaaaatgttctattataaattgtgaaggcacagaaagtgggctgta 289
Query: 186 ttttgcaaaatatatcatgcagaattcaagggttttacagacaatgac 233
||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 288 ttttgcaaaatatattatgcagaattcaagagttttacggacaatgac 241
>gnl|LJGI|TC69848 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (17%)
Length = 651
Score = 115 bits (58), Expect = 2e-25
Identities = 121/142 (85%)
Strand = Plus / Plus
Query: 114 tcctgaatgcctttcttcacagcttagaaagtgttctattacaaattatgatagcacgag 173
|||||| || ||||||||||||||||| |||||||| |||||||||||| | ||||||
Sbjct: 270 tcctgagtgtctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaa 329
Query: 174 atttcagctgcattttgcaaaatatatcatgcagaattcaagggttttacagacaatgac 233
| | ||||||||||||||| |||||| ||||||| ||| || ||||||||||| ||| |
Sbjct: 330 aagtgagctgcattttgcaacatatattatgcagagttccagagttttacagacgatggc 389
Query: 234 catatacaccgcgccttcctca 255
|||| |||| ||||| ||||||
Sbjct: 390 catagacactgcgccatcctca 411
>gnl|LJGI|GO015698 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 764
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 90 ggtttggatttcccccaaatttgttcctgaatgcctttcttcacagcttagaaagtgttc 149
|||||||||||||||| |||| ||||||||| ||||||||||||||||| || |||||
Sbjct: 363 ggtttggatttccccctgttttgctcctgaatgtctttcttcacagcttaggaaatgttc 304
Query: 150 tattacaaattatgatagcacgagatttcagctgcattttgcaaaatatatcatgcagaa 209
|||| |||||||| ||| | | | |||||||||||||||||||||| ||||||||
Sbjct: 303 cattataaattatgcaggcagggaaagtgagctgcattttgcaaaatatattatgcagaa 244
Query: 210 ttcaagggttttacagacaatgac 233
||||| ||||||| |||||||||
Sbjct: 243 ttcaaaagttttacggacaatgac 220
>gnl|LJGI|BW596571 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 486
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 90 ggtttggatttcccccaaatttgttcctgaatgcctttcttcacagcttagaaagtgttc 149
|||||||||||||||| |||| ||||||||| ||||||||||||||||| || |||||
Sbjct: 247 ggtttggatttccccctgttttgctcctgaatgtctttcttcacagcttaggaaatgttc 306
Query: 150 tattacaaattatgatagcacgagatttcagctgcattttgcaaaatatatcatgcagaa 209
|||| |||||||| ||| | | | |||||||||||||||||||||| ||||||||
Sbjct: 307 cattataaattatgcaggcagggaaagtgagctgcattttgcaaaatatattatgcagaa 366
Query: 210 ttcaagggttttacagacaatgac 233
||||| ||||||| |||||||||
Sbjct: 367 ttcaaaagttttacggacaatgac 390
>gnl|LJGI|TC65375 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 627
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 90 ggtttggatttcccccaaatttgttcctgaatgcctttcttcacagcttagaaagtgttc 149
|||||||||||||||| |||| ||||||||| ||||||||||||||||| || |||||
Sbjct: 210 ggtttggatttccccctgttttgctcctgaatgtctttcttcacagcttaggaaatgttc 269
Query: 150 tattacaaattatgatagcacgagatttcagctgcattttgcaaaatatatcatgcagaa 209
|||| |||||||| ||| | | | |||||||||||||||||||||| ||||||||
Sbjct: 270 cattataaattatgcaggcagggaaagtgagctgcattttgcaaaatatattatgcagaa 329
Query: 210 ttcaagggttttacagacaatgac 233
||||| ||||||| |||||||||
Sbjct: 330 ttcaaaagttttacggacaatgac 353
>gnl|LJGI|TC60064
Length = 1179
Score = 83.8 bits (42), Expect = 6e-16
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 114 tcctgaatgcctttcttcacagcttagaaagtgttctattacaaattatgatagcacg-a 172
|||||| || |||||||||||||||| |||||||| |||||||||||| | ||||| |
Sbjct: 869 tcctgantgtctttcttcacagcttangaagtgttccattacaaattataaaggcacgaa 928
Query: 173 gatttcagctgcattttgcaaaatatatcatgcagaattc 212
| || ||||||||||||||| |||||| |||||||||||
Sbjct: 929 aagttgagctgcattttgcaacatatattatgcagaattc 968
>gnl|LJGI|TC64714 similar to UniRef100_Q2HUK1 Cluster: FBD; n=1; Medicago
truncatula|Rep: FBD - Medicago truncatula (Barrel
medic), partial (14%)
Length = 791
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 179 agctgcattttgcaaaatatatcatgcagaattcaagggttttacagacaatgaccatat 238
|||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||
Sbjct: 408 agctgcattttgcaaaatatattatgcagaattcaagagttttacgaacaatgacaatat 467
>gnl|LJGI|TC74716 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (7%)
Length = 503
Score = 65.9 bits (33), Expect = 1e-10
Identities = 89/107 (83%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 109 tttgttcctgaatgcctttcttcacagcttagaaagtgttctattacaaattatgatagc 168
||||||||||||||||||||||||||||||| | ||||| ||||| |||||| | ||
Sbjct: 5 tttgttcctgaatgcctttcttcacagcttaagacgtgttttattatgaattataaaggc 64
Query: 169 acgagatttcagctgcattttgcaaaatatatcatgcagaattcaag 215
| || | || ||||||||||||||||||| ||| ||||||||||
Sbjct: 65 gccag---tgagttgcattttgcaaaatatattatggagaattcaag 108
>gnl|LJGI|TC61348 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1489
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 109 tttgttcctgaatgcctttcttcacagcttagaaagtg 146
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 1097 tttgttcctgaatgccttacttcacagtttagaaagtg 1134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 187 tttgcaaaatatatcatgcagaattc 212
||||||||||||||||||||||||||
Sbjct: 1175 tttgcaaaatatatcatgcagaattc 1200
>gnl|LJGI|FS343807
Length = 619
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 109 tttgttcctgaatgcctttcttcacagcttagaaagtg 146
||||||||||||||| |||||||||| ||||| |||||
Sbjct: 211 tttgttcctgaatgcttttcttcacatcttaggaagtg 248