Miyakogusa Predicted Gene

Lj0g3v0087099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0087099.1 Non Chatacterized Hit- tr|B9T490|B9T490_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,65.45,0.00000000000002, ,CUFF.4641.1
         (534 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73101 similar to UniRef100_Q0E172 Cluster: Os02g04817...   278   3e-74
gnl|LJGI|AV780992 similar to UniRef100_Q9ZXB4 Cluster: Lys; n=1;...    74   1e-12

>gnl|LJGI|TC73101 similar to UniRef100_Q0E172 Cluster: Os02g0481700 protein; n=2;
           Oryza sativa Japonica Group|Rep: Os02g0481700 protein -
           Oryza sativa subsp. japonica (Rice), partial (6%)
          Length = 492

 Score =  278 bits (140), Expect = 3e-74
 Identities = 143/144 (99%)
 Strand = Plus / Plus

                                                                       
Query: 386 ctcaaaagcttatatttgctcctattaacttcgttaggaggcctttccagaaaaaggaga 445
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1   ctcaaaagcttatatttgctcctattaacttcgttaggagccctttccagaaaaaggaga 60

                                                                       
Query: 446 ttgtccttccagcagaaggtgtcaactctctctgtcagcaaattcatcgtgtacttcaca 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtccttccagcagaaggtgtcaactctctctgtcagcaaattcatcgtgtacttcaca 120

                                   
Query: 506 gtcatgaggagtcttcatttcagg 529
           ||||||||||||||||||||||||
Sbjct: 121 gtcatgaggagtcttcatttcagg 144


>gnl|LJGI|AV780992 similar to UniRef100_Q9ZXB4 Cluster: Lys; n=1; Leuconostoc phage
           10MC|Rep: Lys - Leuconostoc phage 10MC, partial (4%)
          Length = 561

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 488 ttcatcgtgtacttcacagtcatgaggagtcttcatttcag 528
           |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ttcatcgtgtacttcacagtcacgaggagtcttcatttcag 521