Miyakogusa Predicted Gene
- Lj0g3v0086889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0086889.1 tr|G7JD59|G7JD59_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g006290 PE=4 SV=1,45.93,4e-19,SUBFAMILY
NOT NAMED,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; RNI-like,NULL;
seg,NULL; F-box,F-b,CUFF.4623.1
(655 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322002 weakly similar to UniRef100_A9U3I4 Cluster: Pr... 420 e-117
gnl|LJGI|FS336580 weakly similar to UniRef100_Q41645 Cluster: Ex... 315 2e-85
>gnl|LJGI|FS322002 weakly similar to UniRef100_A9U3I4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(14%)
Length = 682
Score = 420 bits (212), Expect = e-117
Identities = 340/382 (89%), Gaps = 3/382 (0%)
Strand = Plus / Plus
Query: 62 accaccattacttggagtctgtctccctcgtctccaagcaattcctctccatcaccaacc 121
|||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||
Sbjct: 104 accaccatcacttggagtctctgtcccttgtctccaagcaattcctctccatcaccaacc 163
Query: 122 gcatccgatccaccctcgccatccccgaccccacactccctttcctccctcgcctcctcc 181
||||||||| | |||||||| ||| |||| | |||||| |||||||||||||||||||
Sbjct: 164 gcatccgattctccctcgccgtccacgacgacctactccccttcctccctcgcctcctcc 223
Query: 182 acaggttccccaatctcacctcccttgacctcacgcgcttccgcggtgacctcgacgcgc 241
|||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 224 acaggtaccccaacctcacctccctcgacctcacgcgcttccgcggtgacctcgacgcgc 283
Query: 242 ttctcctccaaatctcgcgctaccccttgcgccgcctcacatccctcgacgtctcgcacc 301
||||||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||
Sbjct: 284 ttctcctccaaatctcgcgtttccccttgcgccgcctcacatcgcttgacttctcgcacc 343
Query: 302 atccaacgtttccggcaaatgggttgcgaggtttggctgaaaagatgaaaacgttgacct 361
|| |||||||||||||||||||||||||| |||||| ||||| | |||||| |||||||
Sbjct: 344 atgaaacgtttccggcaaatgggttgcgagctttggccgaaaacacgaaaaccttgacct 403
Query: 362 ctctcacctgttcccacatgggttctctctcaatcgccgacattctcctcatcaccgatt 421
| ||||||| ||| | |||||||||| ||| ||||||| | | ||||||||||||||
Sbjct: 404 ccctcacctcctccga---gggttctctcgcaaccgccgacctccacctcatcaccgatt 460
Query: 422 gctcccctttcctccaagaact 443
| | ||||||||||||||||||
Sbjct: 461 gtttccctttcctccaagaact 482
Score = 125 bits (63), Expect = 4e-28
Identities = 102/115 (88%)
Strand = Plus / Plus
Query: 490 cccctggcgcttcccaagctccttcgcaaggttaatctctctggcgaatccttcatcatc 549
||||||||||||||||||||||| |||||||||| ||||| | ||| | |||||| ||||
Sbjct: 514 cccctggcgcttcccaagctcctccgcaaggttactctctattgcggacccttcaacatc 573
Query: 550 aacgacgaagagctaatcagagtgtgcaagaactgtgaatttctcgaagaattgg 604
||||||| |||||| ||||| |||||||| |||||||| |||||| |||||||||
Sbjct: 574 aacgacgcagagcttatcagtgtgtgcaacaactgtgagtttctccaagaattgg 628
>gnl|LJGI|FS336580 weakly similar to UniRef100_Q41645 Cluster: Extensin; n=1; Volvox
carteri|Rep: Extensin - Volvox carteri, partial (6%)
Length = 786
Score = 315 bits (159), Expect = 2e-85
Identities = 330/387 (85%)
Strand = Plus / Plus
Query: 67 cattacttggagtctgtctccctcgtctccaagcaattcctctccatcaccaaccgcatc 126
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cattacatggaatctgtctccctcgtctccaagcaattcctctccatcaccaaccgcatc 279
Query: 127 cgatccaccctcgccatccccgaccccacactccctttcctccctcgcctcctccacagg 186
|||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||
Sbjct: 280 cgatccaccctcgccatctccgaccacacactccccttcctccctctcctcctccacagg 339
Query: 187 ttccccaatctcacctcccttgacctcacgcgcttccgcggtgacctcgacgcgcttctc 246
|||||||| ||||||||||| || |||||| |||| | | ||||||| || |||||
Sbjct: 340 ttccccaacctcacctccctcgagttcacgcacttctatgatttcctcgacacggttctc 399
Query: 247 ctccaaatctcgcgctaccccttgcgccgcctcacatccctcgacgtctcgcaccatcca 306
||||||||||||||||||||||||||||||||||||| ||| || ||||||||| | ||
Sbjct: 400 ttccaaatctcgcgctaccccttgcgccgcctcacatcgctcaacatctcgcaccgtgca 459
Query: 307 acgtttccggcaaatgggttgcgaggtttggctgaaaagatgaaaacgttgacctctctc 366
| ||||| || |||||||||||| |||||| ||||| | ||||| ||||||||||||
Sbjct: 460 ccatttcccacagatgggttgcgagctttggccgaaaacacaaaaactttgacctctctc 519
Query: 367 acctgttcccacatgggttctctctcaatcgccgacattctcctcatcaccgattgctcc 426
| || || |||||| || ||||||| | |||| | ||| |||||||| ||| | |
Sbjct: 520 aattgctctgacatggattatctctcatactacgacttcctcttcatcaccaattctttc 579
Query: 427 cctttcctccaagaacttgaccttagc 453
||||||||| ||||||| ||| |||||
Sbjct: 580 cctttcctcgaagaactcgacattagc 606
Score = 117 bits (59), Expect = 9e-26
Identities = 130/153 (84%), Gaps = 8/153 (5%)
Strand = Plus / Plus
Query: 502 cccaagctccttcgcaaggttaatctctctggcgaatccttcatcatcaacgacgaagag 561
||||||||||| |||||||||||||||||||||| ||||||||| | | |||| ||||
Sbjct: 637 cccaagctcctccgcaaggttaatctctctggcggatccttcattacc---gacgcagag 693
Query: 562 ctaatcagagtgtgcaagaactgtgaatttctcgaagaattggtgattttcgaatgccct 621
|| ||||| | ||||||||||||| | ||||||||||||||||| || || ||||||||
Sbjct: 694 cttatcagtgcgtgcaagaactgtaagtttctcgaagaattggtcatctttcaatgccct 753
Query: 622 ttgataacccagc-----attgcttccgcgatc 649
||| ||||||||| |||||||||||||||
Sbjct: 754 ttgttaacccagcgtggcattgcttccgcgatc 786