Miyakogusa Predicted Gene

Lj0g3v0086789.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0086789.1 Non Chatacterized Hit- tr|D5A823|D5A823_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,26.42,0.000000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,CUFF.4616.1
         (928 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72063                                                      805   0.0  

>gnl|LJGI|TC72063 
          Length = 489

 Score =  805 bits (406), Expect = 0.0
 Identities = 409/410 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgtttttactaaaacgacccaacaattttcttaattccaactctatcctcaccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  atgtcgtttttactaaaacgacccaacaattttcttaattccaactctatcctcaccttc 105

                                                                       
Query: 61  acccttcgccgcctcaccaccctcgccgcgaaacccttccccgaccaccctacctccgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 acccttcgccgcctcaccaccctcgccgcgaaacccttccccgaccaccctacctccgcc 165

                                                                       
Query: 121 tactacgacgaactcgccgtcgaagccggaacctccggcgacctcaacgccctccgcgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tactacgacgaactcgccgtcgaagccggaacctccggcgacctcaacgccctccgcgac 225

                                                                       
Query: 181 atcctcaacaagcgcttccaagacggctgcttcaacaccaagcacaccttcagcttcatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atcctcaacaagcgcttccaagacggctgcttcaacaccaagcacaccttcagcttcatc 285

                                                                       
Query: 241 accgccaccaacctcacctccaccctcatcgacgacgttgttcgcaccctctctggcctc 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 286 accgccaccaacctcacctccaccctcatcgacgacgtcgttcgcaccctctctggcctc 345

                                                                       
Query: 301 aaccctggcttcacgcgcaagagcgcgttcgaatccctcgtcacgcgcctatgcaagctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaccctggcttcacgcgcaagagcgcgttcgaatccctcgtcacgcgcctatgcaagctc 405

                                                             
Query: 361 gaacgcgccgacgacgctctccaagtggttgaatccatggcggttgaggg 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaacgcgccgacgacgctctccaagtggttgaatccatggcggttgaggg 455