Miyakogusa Predicted Gene

Lj0g3v0086049.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0086049.1 Non Chatacterized Hit- tr|K3Y8L3|K3Y8L3_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010555,89.47,0.064,GCD14,tRNA
(adenine(58)-N(1))-methyltransferase catalytic subunit
GCD14,CUFF.4558.1
         (174 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72811 similar to UniRef100_A2Q516 Cluster: SAM (And s...    80   5e-15

>gnl|LJGI|TC72811 similar to UniRef100_A2Q516 Cluster: SAM (And some other
           nucleotide) binding motif; n=1; Medicago truncatula|Rep:
           SAM (And some other nucleotide) binding motif - Medicago
           truncatula (Barrel medic), partial (95%)
          Length = 1280

 Score = 79.8 bits (40), Expect = 5e-15
 Identities = 82/97 (84%), Gaps = 8/97 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttaaaacaagacgcgatattatgtttattctccccatgtatcgaacaagtacaagtg 60
           ||||||||||||||||| |  || || | ||||||||||||||||||||||||||     
Sbjct: 810 atgttaaaacaagacgccacgttgtgctcattctccccatgtatcgaacaagtac----- 864

                                                
Query: 61  tacaacgatcatgtgaaacacttcaaaccagcttcac 97
              ||||||||||||||||||||| ||||||||||||
Sbjct: 865 ---aacgatcatgtgaaacacttcgaaccagcttcac 898