Miyakogusa Predicted Gene

Lj0g3v0085939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0085939.1 tr|A8Q2Q3|A8Q2Q3_BRUMA SH2 domain containing
protein OS=Brugia malayi GN=Bm1_41520 PE=4 SV=1,32.05,3.3,
,CUFF.4548.1
         (272 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64194 similar to UniRef100_A7P009 Cluster: Chromosome...   359   6e-99

>gnl|LJGI|TC64194 similar to UniRef100_A7P009 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (22%)
          Length = 1384

 Score =  359 bits (181), Expect = 6e-99
 Identities = 184/185 (99%)
 Strand = Plus / Minus

                                                                        
Query: 81   agacaaaattccccatccagtaggaatgaaagctaacatagcagcaaatatgtcagccac 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 agacaaaattccccatccagtaggaatgaaagctaacatagcagcaaatatgtcagccac 980

                                                                        
Query: 141  agatagatcggtcaatataactgcaacaactaagccagccaatgccaacaaaagggagag 200
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 979  agatagatcggtcaatataactgcaacgactaagccagccaatgccaacaaaagggagag 920

                                                                        
Query: 201  gccttgtacaaaacgcaacagaagctggaaattgactgatatcttctggctaaatgtgaa 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  gccttgtacaaaacgcaacagaagctggaaattgactgatatcttctggctaaatgtgaa 860

                 
Query: 261  aacct 265
            |||||
Sbjct: 859  aacct 855