Miyakogusa Predicted Gene

Lj0g3v0085909.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0085909.1 tr|C0Z237|C0Z237_ARATH AT3G58170 protein
OS=Arabidopsis thaliana GN=AT3G58170 PE=4 SV=1,60.53,2e-18,no
description,NULL; T_SNARE,Target SNARE coiled-coil domain; seg,NULL;
BET1-LIKE SNARE 1,NULL; GOLG,CUFF.4568.1
         (405 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65385 weakly similar to UniRef100_A7NXV2 Cluster: Chr...   803   0.0  

>gnl|LJGI|TC65385 weakly similar to UniRef100_A7NXV2 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (61%)
          Length = 692

 Score =  803 bits (405), Expect = 0.0
 Identities = 405/405 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagttacagaagagataatcgctcctccaggtcatcacttttagatggtcttgatagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgagttacagaagagataatcgctcctccaggtcatcacttttagatggtcttgatagt 168

                                                                       
Query: 61  ctggaggagggtggcttaaaggcttcttcctcttactcacatgaaattaatgagcaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ctggaggagggtggcttaaaggcttcttcctcttactcacatgaaattaatgagcaagat 228

                                                                       
Query: 121 aatgataaagctgtggagagtttgcatgacagagttacttttctaaagcgattaacaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aatgataaagctgtggagagtttgcatgacagagttacttttctaaagcgattaacaggt 288

                                                                       
Query: 181 gatatacatgaggaggttgagagtcataacagtttgcttgatcgagtgggtagcaaaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatatacatgaggaggttgagagtcataacagtttgcttgatcgagtgggtagcaaaatg 348

                                                                       
Query: 241 gacggatcaaggggtatgatgttgggaaccatggatcgattcaagaaggtttttgagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gacggatcaaggggtatgatgttgggaaccatggatcgattcaagaaggtttttgagaag 408

                                                                       
Query: 301 aaatcgacaaggaaaacgtgctccctggcagcatatttcacagttgccttcatattcata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aaatcgacaaggaaaacgtgctccctggcagcatatttcacagttgccttcatattcata 468

                                                        
Query: 361 tactatcttattaggatgcttggatattttacacttggatgaagc 405
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tactatcttattaggatgcttggatattttacacttggatgaagc 513