Miyakogusa Predicted Gene

Lj0g3v0085739.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0085739.1 Non Chatacterized Hit- tr|K3Y4M9|K3Y4M9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009167,26.14,9.3,seg,NULL,CUFF.4577.1
         (371 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66838 similar to UniRef100_Q6RHX9 Cluster: Xyloglucan...   420   e-117
gnl|LJGI|TC61589 similar to UniRef100_Q6RHX9 Cluster: Xyloglucan...   145   2e-34
gnl|LJGI|AV776274 similar to UniRef100_Q56UD7 Cluster: Xylogluca...    56   2e-07

>gnl|LJGI|TC66838 similar to UniRef100_Q6RHX9 Cluster: Xyloglucan
           endotransglucosylase-hydrolase XTH6; n=1; Solanum
           lycopersicum|Rep: Xyloglucan
           endotransglucosylase-hydrolase XTH6 - Solanum
           lycopersicum (Tomato) (Lycopersicon esculentum), partial
           (51%)
          Length = 827

 Score =  420 bits (212), Expect = e-117
 Identities = 212/212 (100%)
 Strand = Plus / Plus

                                                                       
Query: 160 gagcataagttgtgcctcaaatcttttgtcacaccctgcattttagcagagtcactctgg 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gagcataagttgtgcctcaaatcttttgtcacaccctgcattttagcagagtcactctgg 62

                                                                       
Query: 220 tttctagtactacaacaatgccatcactactttcttctttcttccatatggttcctctat 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tttctagtactacaacaatgccatcactactttcttctttcttccatatggttcctctat 122

                                                                       
Query: 280 tatctcttcttttctcattcgttgttcattgtactaatgctggtccaccttcaccagggt 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tatctcttcttttctcattcgttgttcattgtactaatgctggtccaccttcaccagggt 182

                                           
Query: 340 actaccttagttccaaaatcagtcctgtaagc 371
           ||||||||||||||||||||||||||||||||
Sbjct: 183 actaccttagttccaaaatcagtcctgtaagc 214


>gnl|LJGI|TC61589 similar to UniRef100_Q6RHX9 Cluster: Xyloglucan
           endotransglucosylase-hydrolase XTH6; n=1; Solanum
           lycopersicum|Rep: Xyloglucan
           endotransglucosylase-hydrolase XTH6 - Solanum
           lycopersicum (Tomato) (Lycopersicon esculentum), partial
           (50%)
          Length = 789

 Score =  145 bits (73), Expect = 2e-34
 Identities = 80/81 (98%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 291 ttctcattcgttgttcattgtactaatgctggtccaccttcaccagggtactaccttagt 350
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1   ttctcattcgttgttcattgtactaatgctggtccac-ttcaccagggtactaccttagt 59

                                
Query: 351 tccaaaatcagtcctgtaagc 371
           |||||||||||||||||||||
Sbjct: 60  tccaaaatcagtcctgtaagc 80


>gnl|LJGI|AV776274 similar to UniRef100_Q56UD7 Cluster: Xyloglucan
           endotransglycosylase; n=1; Prunus armeniaca|Rep:
           Xyloglucan endotransglycosylase - Prunus armeniaca
           (Apricot), partial (28%)
          Length = 350

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 344 ccttagttccaaaatcagtcctgtaagc 371
           ||||||||||||||||||||||||||||
Sbjct: 1   ccttagttccaaaatcagtcctgtaagc 28