Miyakogusa Predicted Gene
- Lj0g3v0085579.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0085579.2 Non Chatacterized Hit- tr|K4B0H3|K4B0H3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.51,2e-19,DUF1517,Protein of unknown function DUF1517;
seg,NULL,CUFF.4519.2
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68409 weakly similar to UniRef100_A7Q5W5 Cluster: Chr... 1065 0.0
gnl|LJGI|TC68001 similar to UniRef100_A7Q5W5 Cluster: Chromosome... 52 4e-06
>gnl|LJGI|TC68409 weakly similar to UniRef100_A7Q5W5 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (43%)
Length = 731
Score = 1065 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Plus
Query: 1 atgaaggatagggagggtgtgaagaaatacttcaatcaactatcaaatgaagaaagggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgaaggatagggagggtgtgaagaaatacttcaatcaactatcaaatgaagaaagggga 170
Query: 61 aaatttgatgaagtgacattagtaaagagatccagtgttaatgtgtttagcaatgaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aaatttgatgaagtgacattagtaaagagatccagtgttaatgtgtttagcaatgaagac 230
Query: 121 acattgtggaatgcaaaggaaagtataaatgtaccacagaaacttgaagaggaacttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acattgtggaatgcaaaggaaagtataaatgtaccacagaaacttgaagaggaacttctg 290
Query: 181 aatgggtctggcaacgagtacatagcgttggatataaaggaaagtgcagatgaatcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aatgggtctggcaacgagtacatagcgttggatataaaggaaagtgcagatgaatcacag 350
Query: 241 aaatttgaagaagaggaacttctcaaagtgtttggtaacgagtacatagtggtaacaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaatttgaagaagaggaacttctcaaagtgtttggtaacgagtacatagtggtaacaatc 410
Query: 301 ttggtagctgctaaaggaacacataagcttcctaacaacaatggagctgaagatttgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttggtagctgctaaaggaacacataagcttcctaacaacaatggagctgaagatttgaag 470
Query: 361 aaagccttacaaaagcttagatccattctccttctcccaagcaaattattagctggtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaagccttacaaaagcttagatccattctccttctcccaagcaaattattagctggtgag 530
Query: 421 gttttatggacgccacaaaaagaggatgaaagtcttccaggacggaaactacttaaagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gttttatggacgccacaaaaagaggatgaaagtcttccaggacggaaactacttaaagac 590
Query: 481 taccctcatttagtagagtctatgaaaagctttagggttaagaaagaggaatagaac 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taccctcatttagtagagtctatgaaaagctttagggttaagaaagaggaatagaac 647
>gnl|LJGI|TC68001 similar to UniRef100_A7Q5W5 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 861
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 283 tacatagtggtaacaatcttggtagctgctaaaggaacacataagcttcctaacaacaat 342
||||||||| |||||||||||| |||||| ||||| |||||| ||||||| || ||||
Sbjct: 124 tacatagtgataacaatcttggcagctgccgaaggagaacataaacttcctagcatcaat 183
Query: 343 gg 344
||
Sbjct: 184 gg 185