Miyakogusa Predicted Gene

Lj0g3v0085169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0085169.1 tr|G7JV27|G7JV27_MEDTR HVA22-like protein a
OS=Medicago truncatula GN=MTR_4g093260 PE=4 SV=1,62.32,5e-18,seg,NULL;
TB2_DP1_HVA22,TB2/DP1/HVA22-related protein; HVA22-LIKE PROTEIN,NULL;
HVA22-LIKE PROTEINS,,CUFF.4482.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62572 homologue to UniRef100_UPI00015DEEEC Cluster: p...   500   e-141

>gnl|LJGI|TC62572 homologue to UniRef100_UPI00015DEEEC Cluster: predicted gene,
           ENSMUSG00000051848; n=1; Mus musculus|Rep: predicted
           gene, ENSMUSG00000051848 - Mus musculus, partial (14%)
          Length = 750

 Score =  500 bits (252), Expect = e-141
 Identities = 252/252 (100%)
 Strand = Plus / Plus

                                                                       
Query: 65  atgtcgttgatacattgaaacctctcgcaactgcaatcacgtgcttgatttcaatggctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  atgtcgttgatacattgaaacctctcgcaactgcaatcacgtgcttgatttcaatggctt 121

                                                                       
Query: 125 ttctcaacttggctctcaaatgctttgaccatctcgcatggcctattcttgctctggggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttctcaacttggctctcaaatgctttgaccatctcgcatggcctattcttgctctggggt 181

                                                                       
Query: 185 atcctatgtgtgcttccgtacgagcaatcgagactgattccattaaggaaatgagggatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcctatgtgtgcttccgtacgagcaatcgagactgattccattaaggaaatgagggatt 241

                                                                       
Query: 245 tgatctcatattggatacttctctcattattatacctatttgagtatgcttttatgtggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgatctcatattggatacttctctcattattatacctatttgagtatgcttttatgtggc 301

                       
Query: 305 ttctccaatggt 316
           ||||||||||||
Sbjct: 302 ttctccaatggt 313



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 1  atgtcctttccatcacaaaccatcgt 26
          ||||||||||||||||||||||||||
Sbjct: 4  atgtcctttccatcacaaaccatcgt 29