Miyakogusa Predicted Gene

Lj0g3v0085019.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0085019.1 Non Chatacterized Hit- tr|K4CT64|K4CT64_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,83.67,0.000000000000002,coiled-coil,NULL; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.4479.1
         (552 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65031 similar to UniRef100_A7NXY6 Cluster: Chromosome...  1086   0.0  
gnl|LJGI|AV428269 similar to UniRef100_A7NXY6 Cluster: Chromosom...   402   e-112

>gnl|LJGI|TC65031 similar to UniRef100_A7NXY6 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 948

 Score = 1086 bits (548), Expect = 0.0
 Identities = 548/548 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   caatggctgccaaagctaaattacttcttcgggagttaaagaccgtcaaagctgatctag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 caatggctgccaaagctaaattacttcttcgggagttaaagaccgtcaaagctgatctag 217

                                                                       
Query: 65  cttttgcaaaggatcgatgtgctcagctagaggaagaaaatagaatccttcatgagaatc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cttttgcaaaggatcgatgtgctcagctagaggaagaaaatagaatccttcatgagaatc 277

                                                                       
Query: 125 gtgaaaggggtgatagccatgatgatgatgatttgatacgacttcaacttgaaactcttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtgaaaggggtgatagccatgatgatgatgatttgatacgacttcaacttgaaactcttt 337

                                                                       
Query: 185 tagctgaaaaagctcggttggctcatgagaactcagtttacgcccgtgagaatcggtttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tagctgaaaaagctcggttggctcatgagaactcagtttacgcccgtgagaatcggtttc 397

                                                                       
Query: 245 taagggaggttgttgaataccaccagcttacaatgcaggatgttgtctactttgatgagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taagggaggttgttgaataccaccagcttacaatgcaggatgttgtctactttgatgagg 457

                                                                       
Query: 305 ccaatgaggaagtgacggaagtgaaccctcttaacttccccccaaggcctgttattactc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ccaatgaggaagtgacggaagtgaaccctcttaacttccccccaaggcctgttattactc 517

                                                                       
Query: 365 catctgcagcatcctcatcattgcctccagaagccaaccttagcatgagttcagaatcaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 catctgcagcatcctcatcattgcctccagaagccaaccttagcatgagttcagaatcaa 577

                                                                       
Query: 425 caagaggtatctcatttcccatatccgaaaaggaagcaaagagttctgaaacgatttcaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caagaggtatctcatttcccatatccgaaaaggaagcaaagagttctgaaacgatttcaa 637

                                                                       
Query: 485 aggatgttaagagttctgaaggcacaagaagtatttcttatacaacaggaaatgatgcaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aggatgttaagagttctgaaggcacaagaagtatttcttatacaacaggaaatgatgcaa 697

                   
Query: 545 aatgacat 552
           ||||||||
Sbjct: 698 aatgacat 705


>gnl|LJGI|AV428269 similar to UniRef100_A7NXY6 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 404

 Score =  402 bits (203), Expect = e-112
 Identities = 203/203 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaatggctgccaaagctaaattacttcttcgggagttaaagaccgtcaaagctgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atggcaatggctgccaaagctaaattacttcttcgggagttaaagaccgtcaaagctgat 261

                                                                       
Query: 61  ctagcttttgcaaaggatcgatgtgctcagctagaggaagaaaatagaatccttcatgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctagcttttgcaaaggatcgatgtgctcagctagaggaagaaaatagaatccttcatgag 321

                                                                       
Query: 121 aatcgtgaaaggggtgatagccatgatgatgatgatttgatacgacttcaacttgaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatcgtgaaaggggtgatagccatgatgatgatgatttgatacgacttcaacttgaaact 381

                                  
Query: 181 cttttagctgaaaaagctcggtt 203
           |||||||||||||||||||||||
Sbjct: 382 cttttagctgaaaaagctcggtt 404