Miyakogusa Predicted Gene

Lj0g3v0084739.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0084739.1 Non Chatacterized Hit- tr|K3XQA6|K3XQA6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si004088,41.46,0.000000000001,seg,NULL,CUFF.4468.1
         (1518 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344425 similar to UniRef100_A7P9B2 Cluster: Chromosom...  1219   0.0  
gnl|LJGI|TC67103 similar to UniRef100_A3PJ50 Cluster: Binding-pr...   329   3e-89

>gnl|LJGI|FS344425 similar to UniRef100_A7P9B2 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 686

 Score = 1219 bits (615), Expect = 0.0
 Identities = 624/626 (99%), Gaps = 2/626 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgaccaaacgcagtctaagaacaagaagaacaacgacgaggatgctgcagaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  atggacgaccaaacgcagtctaagaacaagaagaacaacgacgaggatgctgcagaacaa 122

                                                                       
Query: 61  ccacaagaccctaaactgccagccaccggtggcggagattggggtggttggggcttttca 120
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 123 ccacaagaccctaaactgccagccaccggtggcggagattggggtgg--ggggcttttca 180

                                                                       
Query: 121 ccgctctcctttctatcggatcttcaaaaggccgccgctgtcgccgccgaagagatctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgctctcctttctatcggatcttcaaaaggccgccgctgtcgccgccgaagagatctct 240

                                                                       
Query: 181 cgcaatgctgctgcggttgcacagacagcatcaaagagcattgcggagttggaaaaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgcaatgctgctgcggttgcacagacagcatcaaagagcattgcggagttggaaaaaggt 300

                                                                       
Query: 241 gctgaagattccaaagatggtgaaggtgctgaaggatctgaatctgacaaggaaagtgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgaagattccaaagatggtgaaggtgctgaaggatctgaatctgacaaggaaagtgaa 360

                                                                       
Query: 301 gatgaagatgacaaacggcgaaaatctgctctggataaattggagaaagctagtgatgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgaagatgacaaacggcgaaaatctgctctggataaattggagaaagctagtgatgat 420

                                                                       
Query: 361 tctctgcttagccagggtttgaaggtttttgataattctgtggagacttttgcttctgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctctgcttagccagggtttgaaggtttttgataattctgtggagacttttgcttctgga 480

                                                                       
Query: 421 gcatggagtgctttaggaaatgcgttgaaagggggaactgatttagttcacaggctcgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcatggagtgctttaggaaatgcgttgaaagggggaactgatttagttcacaggctcgat 540

                                                                       
Query: 481 aggccaggagctgcaggttctaatgcaccttccctattagagactggaaaagcttttact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggccaggagctgcaggttctaatgcaccttccctattagagactggaaaagcttttact 600

                                                                       
Query: 541 gcaaagggaatgcaagttcttgaatatgtaggtaaggagacactggacctattaatcagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcaaagggaatgcaagttcttgaatatgtaggtaaggagacactggacctattaatcagt 660

                                     
Query: 601 gaaactggaattgaggttgagaaggc 626
           ||||||||||||||||||||||||||
Sbjct: 661 gaaactggaattgaggttgagaaggc 686


>gnl|LJGI|TC67103 similar to UniRef100_A3PJ50 Cluster: Binding-protein-dependent
           transport systems inner membrane component; n=1;
           Rhodobacter sphaeroides ATCC 17029|Rep:
           Binding-protein-dependent transport systems inner
           membrane component - Rhodobacter sphaeroides (strain
           ATCC 17029 / ATH 2.4.9), partial (7%)
          Length = 588

 Score =  329 bits (166), Expect = 3e-89
 Identities = 172/174 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgaccaaacgcagtctaagaacaagaagaacaacgacgaggatgctgcagaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  atggacgaccaaacgcagtctaagaacaagaagaacaacgacgaggatgctgcagaacaa 83

                                                                       
Query: 61  ccacaagaccctaaactgccagccaccggtggcggagattggggtggttggggcttttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  ccacaagaccctaaactgccagccaccggtggcggagattggggtggttggggcttttca 143

                                                                 
Query: 121 ccgctctcctttctatcggatcttcaaaaggccgccgctgtcgccgccgaagag 174
           ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 144 ccgctctcccttctatcggatcttcaaaaggccgccgctgtcgccgccggagag 197