Miyakogusa Predicted Gene
- Lj0g3v0084329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0084329.1 tr|G7I946|G7I946_MEDTR ATP-dependent DNA helicase
recG OS=Medicago truncatula GN=MTR_1g031120 PE=4 S,80.09,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; Helicase_C,Helicase,,CUFF.4421.1
(1233 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61101 similar to UniRef100_Q6ZFX9 Cluster: ATP-depend... 926 0.0
gnl|LJGI|TC82503 127 2e-28
>gnl|LJGI|TC61101 similar to UniRef100_Q6ZFX9 Cluster: ATP-dependent DNA helicase
RECG-like; n=1; Oryza sativa Japonica Group|Rep:
ATP-dependent DNA helicase RECG-like - Oryza sativa
subsp. japonica (Rice), partial (44%)
Length = 784
Score = 926 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 763 tttaggactggagaaatgcatatactacttgccacacaagtaattgaaattggtgttgac 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tttaggactggagaaatgcatatactacttgccacacaagtaattgaaattggtgttgac 144
Query: 823 gttccagacgcatctatgatggttgtgttgaattctgagaggtttggaattgcccaatta 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gttccagacgcatctatgatggttgtgttgaattctgagaggtttggaattgcccaatta 204
Query: 883 caccaactcaggggacgagttggtcgcggaacacggcagtcaaaatgtatactagtagcg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 caccaactcaggggacgagttggtcgcggaacacggcagtcaaaatgtatactggtagcg 264
Query: 943 tcgactgcaagtagcctaaatcgtttgaaagtactggagcaatcatcagatgggttccat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcgactgcaagtagcctaaatcgtttgaaagtactggagcaatcatcagatgggttccat 324
Query: 1003 cttgctaatatggaccttttattgcgtggacctggtgacttgcttgggaagaaacaatct 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttgctaatatggaccttttattgcgtggacctggtgacttgcttgggaagaaacaatct 384
Query: 1063 ggacatcttcctgagtttcctattacccgattggaagttgatggaaatattttacaagaa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggacatcttcctgagtttcctattacccgattggaagttgatggaaatattttacaagaa 444
Query: 1123 gcacacgttgcggcactgaaaattttaagtgcttcccatgatttggagcgatttcctgca 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcacacgttgcggcactgaaaattttaagtgcttcccatgatttggagcgatttcctgca 504
Query: 1183 cttaaacgggagcttagcatgagacagccactttgcttgctaggtgattga 1233
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttaaacgggagcttagcatgagacagccactttgcttgctaggtgattga 555
Score = 83.8 bits (42), Expect = 2e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 680 tgtcaaaccggtttcatggatacaattgtggtttactacatg 721
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgtcaaaccggtttcatggatacaattgtggtttactacatg 43
>gnl|LJGI|TC82503
Length = 564
Score = 127 bits (64), Expect = 2e-28
Identities = 81/84 (96%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1095 ggaagttgatggaaatattttacaagaagcacacgttgcggcactgaaaattttaagtgc 1154
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggaagttgatggaaatattttacaagaagcacacgttccggcactgaaaattttaagtgc 60
Query: 1155 ttc-ccatga-tttggagcgattt 1176
||| |||||| |||||||||||||
Sbjct: 61 ttcgccatgactttggagcgattt 84