Miyakogusa Predicted Gene
- Lj0g3v0084249.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0084249.1 tr|E4MY31|E4MY31_THEHA mRNA, clone: RTFL01-36-L20
OS=Thellungiella halophila PE=2 SV=1,39,0.000000001,helix loop helix
domain,Helix-loop-helix domain; seg,NULL; HLH, helix-loop-helix
DNA-binding domain,,NODE_8577_length_1720_cov_81.385468.path2.1
(1428 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59306 weakly similar to UniRef100_A7PJR3 Cluster: Chr... 1247 0.0
>gnl|LJGI|TC59306 weakly similar to UniRef100_A7PJR3 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 792
Score = 1247 bits (629), Expect = 0.0
Identities = 632/633 (99%)
Strand = Plus / Plus
Query: 1 atgaacaacagtgctcctgattggaattttgggagtgatacctgtctcaccaaccaaaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 160 atgaacaacagtgctcctgattggaattttgggagtgatacctgtctcaccagccaaaag 219
Query: 61 aaacccatagggatggacaatgatcttgtggagatcctttggcaaaatggccagctagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aaacccatagggatggacaatgatcttgtggagatcctttggcaaaatggccagctagta 279
Query: 121 ttgcagagccaagcacataagaaatcagttgtgaattctatcgcctcaagacaggttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttgcagagccaagcacataagaaatcagttgtgaattctatcgcctcaagacaggttaac 339
Query: 181 aaaaaatttcaaccaacattgaggactagtgatccatttgggatgatccaagatgatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaaaaatttcaaccaacattgaggactagtgatccatttgggatgatccaagatgatgag 399
Query: 241 acaatctcatggatccaataccctccggaccattcgctggaacaagaattatgttcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acaatctcatggatccaataccctccggaccattcgctggaacaagaattatgttcagaa 459
Query: 301 cttttatctgaactgcctctctgtgaagttgagtcttacaggcaaatcaggcaatttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cttttatctgaactgcctctctgtgaagttgagtcttacaggcaaatcaggcaatttgga 519
Query: 361 gatgcaaagttttccaaattggatgattccagtatgaaaccctcctgtgttcaggaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gatgcaaagttttccaaattggatgattccagtatgaaaccctcctgtgttcaggaattc 579
Query: 421 tcaggaattcctatgcctgctccaaaatttcatgcttctgattcatatcagaaaaacaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tcaggaattcctatgcctgctccaaaatttcatgcttctgattcatatcagaaaaacaag 639
Query: 481 gtccaaaactttccccacttttcagcactccctattgtttctacagcatctgctaatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtccaaaactttccccacttttcagcactccctattgtttctacagcatctgctaatgca 699
Query: 541 catttgagagacaaaattgctggtaataatgtgtcaaaaggtgagattagagagtgctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 catttgagagacaaaattgctggtaataatgtgtcaaaaggtgagattagagagtgctca 759
Query: 601 gtgatgacggttggttcgagtcactgcggaagc 633
|||||||||||||||||||||||||||||||||
Sbjct: 760 gtgatgacggttggttcgagtcactgcggaagc 792