Miyakogusa Predicted Gene

Lj0g3v0084219.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0084219.1 Non Chatacterized Hit- tr|I1N124|I1N124_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,67.24,0.00000000000002,seg,NULL,9629_g.1
         (175 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76898 weakly similar to UniRef100_A7PJR5 Cluster: Chr...   347   1e-95
gnl|LJGI|TC69940 similar to UniRef100_A7PJR5 Cluster: Chromosome...    50   4e-06

>gnl|LJGI|TC76898 weakly similar to UniRef100_A7PJR5 Cluster: Chromosome chr12
           scaffold_18, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1016

 Score =  347 bits (175), Expect = 1e-95
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgagaaaattacagctgcgaaccttctttacaaccttgtggacacatttgctgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgtctgagaaaattacagctgcgaaccttctttacaaccttgtggacacatttgctgag 172

                                                                       
Query: 61  aagggaaaagttgaatcattctttgaaaacgagaattcaaactcagcaagctctcaggtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aagggaaaagttgaatcattctttgaaaacgagaattcaaactcagcaagctctcaggtc 232

                                                                  
Query: 121 aacaaattgtttcaacgccagaaaaccgtccaccatcttttaggaggtggaaaat 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aacaaattgtttcaacgccagaaaaccgtccaccatcttttaggaggtggaaaat 287


>gnl|LJGI|TC69940 similar to UniRef100_A7PJR5 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1114

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 75  atcattctttgaaaacgagaattcaaactcagcaagctctcaggtcaacaaattgtttca 134
           ||||||||||||| | |||||  | |||||||  ||||| ||  |||| | | |||||  
Sbjct: 182 atcattctttgaagaagagaagcctaactcagtgagctcccaattcaatagactgtttgg 241

                                                    
Query: 135 acgccagaaaaccgtccaccatcttttaggaggtggaaaat 175
           |||||||||| |||| ||||||||| |||| ||||||||||
Sbjct: 242 acgccagaaacccgtgcaccatcttctagggggtggaaaat 282