Miyakogusa Predicted Gene

Lj0g3v0083669.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0083669.1 Non Chatacterized Hit- tr|G7IGQ6|G7IGQ6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,26.24,0.0000000002,RNA-binding domain, RBD,NULL; seg,NULL;
no description,Nucleotide-binding, alpha-beta plait;
RRM_1,R,CUFF.4384.1
         (984 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337198 similar to UniRef100_A4EVZ5 Cluster: Drug resi...   355   3e-97

>gnl|LJGI|FS337198 similar to UniRef100_A4EVZ5 Cluster: Drug resistance transporter
           Bcr/CflA subfamily protein; n=1; Roseobacter sp.
           SK209-2-6|, partial (4%)
          Length = 260

 Score =  355 bits (179), Expect = 3e-97
 Identities = 179/179 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtcgtgaagggtagggactctgctagggtttcgactgcttggagggatggtggtaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  atggtcgtgaagggtagggactctgctagggtttcgactgcttggagggatggtggtaga 141

                                                                       
Query: 61  tggcaaggtggagtcactttatttgttgatggtttgagtgccagatcaaattacagacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tggcaaggtggagtcactttatttgttgatggtttgagtgccagatcaaattacagacat 201

                                                                      
Query: 121 gtgcgaagtatgtttgagaattttggaaaggtggagaggctcttcatctcgagaagcac 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtgcgaagtatgtttgagaattttggaaaggtggagaggctcttcatctcgagaagcac 260