Miyakogusa Predicted Gene

Lj0g3v0082249.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0082249.1 Non Chatacterized Hit- tr|K4CQS4|K4CQS4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48,4e-18,DUF668,Protein of unknown function DUF668;
DUF3475,Protein of unknown function DUF3475; SUBFAMILY NO,CUFF.4286.1
         (1812 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW632953 similar to UniRef100_A7NX45 Cluster: Chromosom...   331   9e-90

>gnl|LJGI|BW632953 similar to UniRef100_A7NX45 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 505

 Score =  331 bits (167), Expect = 9e-90
 Identities = 311/359 (86%)
 Strand = Plus / Plus

                                                                       
Query: 442 gttaagcatatggaaggaatggtgaggaaactggataggtatgttagcaccaccaggaat 501
           |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||
Sbjct: 1   gttaagcatatggaaggaatggtgaggaaaatggataggtatgttagtgtcaccaggaat 60

                                                                       
Query: 502 ttgtacagggaaatggaggtcttgaatcaattggagcaagcggtgaagaagcttcagcat 561
           |||||||| ||| |||||||  ||| | ||||||||||||| ||||||||| ||||||||
Sbjct: 61  ttgtacagtgaattggaggtgctgagtgaattggagcaagcagtgaagaagtttcagcat 120

                                                                       
Query: 562 agccagcacgaggagagtagaagggcgttcgagcagaaactcgcgtggcaaaagcaagat 621
           |  ||||| || ||||||||||||||||| ||||||||||| |  ||||| || ||||||
Sbjct: 121 aatcagcatgaagagagtagaagggcgtttgagcagaaacttgtatggcagaaacaagat 180

                                                                       
Query: 622 gtgaggcatctgaaggagatatcactctggaatcagacctttgataaggttgttgagttg 681
           || |||||||| ||||| || || || ||||| ||||| |||||||||||||||||||||
Sbjct: 181 gttaggcatcttaaggatatttccctttggaaccagacatttgataaggttgttgagttg 240

                                                                       
Query: 682 ttggccaggacagtttgtaccatttatgctaggatctgtatgatttttggtgattctgct 741
           ||||| ||||||||||| ||||||||||||||||| | | ||||||| ||||| ||||||
Sbjct: 241 ttggcgaggacagtttgcaccatttatgctaggatttctgtgattttcggtgagtctgct 300

                                                                      
Query: 742 gggaggaagcatagccttgggcttggtggaggttcaccaccaatgcaaaatgaatgtgg 800
             ||||||| ||||||||||| | |||||||| || ||    |||||||||||||||||
Sbjct: 301 ttgaggaagaatagccttggggtcggtggaggctcgccgggtatgcaaaatgaatgtgg 359