Miyakogusa Predicted Gene
- Lj0g3v0082229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0082229.1 Non Chatacterized Hit- tr|I1M1T8|I1M1T8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27266
PE,63.89,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.4282.1
(447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP049589 weakly similar to UniRef100_A7QDK1 Cluster: Ch... 391 e-108
gnl|LJGI|AV767148 weakly similar to UniRef100_A7PJH5 Cluster: Ch... 331 2e-90
gnl|LJGI|BF177722 homologue to UniRef100_P42131 Cluster: Sperm p... 256 1e-67
gnl|LJGI|AV415806 similar to UniRef100_Q8W3M8 Cluster: 6b-intera... 119 2e-26
gnl|LJGI|TC78417 similar to UniRef100_A7QDK1 Cluster: Chromosome... 119 2e-26
>gnl|LJGI|BP049589 weakly similar to UniRef100_A7QDK1 Cluster: Chromosome chr10
scaffold_81, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_81, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 523
Score = 391 bits (197), Expect = e-108
Identities = 233/245 (95%)
Strand = Plus / Minus
Query: 203 agaggggaagaagggattgggaatttgggtacagagatgttgcagaggccatagagaggt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agaggggaagaagggattgggaatttgggtacagagatgttgcagaggccatagagaggt 464
Query: 263 ttggggagatatatgagagggtggagttagcaaagcaaaggcaaatgatggagttggaga 322
||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 463 ttggggagatatatgagagggtggagttagccaagccaaggccaatgatggagttggaga 404
Query: 323 tacagaggatgcaatttgctaaggatttggagtaccagaggatgcagctcttcatggaaa 382
||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 403 taccgaggatgccatttgctaaggatttggagtacccgaggatgcagctcttcatgggaa 344
Query: 383 ctcaagtgcagcttcaaaaaatcaacacctccaagcgatcttctacacctgatagtttct 442
||| ||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct: 343 ctccagtgcagcttccaaaaatccacacctcccagcgatcttttacacctgatagtttct 284
Query: 443 cgtag 447
|||||
Sbjct: 283 cgtag 279
>gnl|LJGI|AV767148 weakly similar to UniRef100_A7PJH5 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 389
Score = 331 bits (167), Expect = 2e-90
Identities = 167/167 (100%)
Strand = Plus / Minus
Query: 281 gggtggagttagcaaagcaaaggcaaatgatggagttggagatacagaggatgcaatttg 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gggtggagttagcaaagcaaaggcaaatgatggagttggagatacagaggatgcaatttg 330
Query: 341 ctaaggatttggagtaccagaggatgcagctcttcatggaaactcaagtgcagcttcaaa 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctaaggatttggagtaccagaggatgcagctcttcatggaaactcaagtgcagcttcaaa 270
Query: 401 aaatcaacacctccaagcgatcttctacacctgatagtttctcgtag 447
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaatcaacacctccaagcgatcttctacacctgatagtttctcgtag 223
>gnl|LJGI|BF177722 homologue to UniRef100_P42131 Cluster: Sperm protamine-P1; n=1;
Caenolestes fuliginosus|Rep: Sperm protamine-P1 -
Caenolestes fuliginosus (Shrew opossum), partial (33%)
Length = 385
Score = 256 bits (129), Expect = 1e-67
Identities = 152/157 (96%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 80 cttcgccggcgaatttggacaactcgtacctccggcagaaactgtcggcgttcgcagcgg 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cttcgccggcgaatttggacaactcgtacctccggcagaaactgtcggcgttcgcagcgg 288
Query: 140 cggctgctgcggcggcg-gaggcggagaagaacagtg-agaattcgaatggttcaaaggg 197
||||||||||||||||| || ||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 289 cggctgctgcggcggcgtgaagcggacaagaacagtgtagaattccaatggttcaaaggg 348
Query: 198 gaagaagaggggaagaagggattgggaatttgggtac 234
|||||||||||||||||||||||||||||||||||||
Sbjct: 349 gaagaagaggggaagaagggattgggaatttgggtac 385
>gnl|LJGI|AV415806 similar to UniRef100_Q8W3M8 Cluster: 6b-interacting protein 1; n=1;
Nicotiana tabacum|Rep: 6b-interacting protein 1 -
Nicotiana tabacum (Common tobacco), partial (8%)
Length = 237
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1 atggactcccccgccggagcgccgccgcaccccgtcgcatctcggccggcgccgtttccg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 111 atggactcccccgccggagcgccgccgcaccccgtcgcatctcggccgtcgccgtttccg 170
Query: 61 gctc 64
||||
Sbjct: 171 gctc 174
>gnl|LJGI|TC78417 similar to UniRef100_A7QDK1 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 460
Score = 119 bits (60), Expect = 2e-26
Identities = 93/104 (89%)
Strand = Plus / Plus
Query: 301 aggcaaatgatggagttggagatacagaggatgcaatttgctaaggatttggagtaccag 360
||||||||| |||||||||||| ||||||||||| ||||||||||||||||| || |||
Sbjct: 2 aggcaaatggtggagttggagaagcagaggatgcagtttgctaaggatttggaatatcag 61
Query: 361 aggatgcagctcttcatggaaactcaagtgcagcttcaaaaaat 404
||||||||||| ||||||||||| || || ||||| ||||||||
Sbjct: 62 aggatgcagcttttcatggaaacacaggttcagctgcaaaaaat 105