Miyakogusa Predicted Gene

Lj0g3v0082129.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0082129.1 tr|B9S9Q8|B9S9Q8_RICCO Pectinesterase OS=Ricinus
communis GN=RCOM_0521220 PE=3
SV=1,61.64,1e-18,Pectinesterase,Pectinesterase, catalytic; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no descri,CUFF.4285.1
         (250 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76166                                                      323   3e-88
gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Pr...   250   3e-66

>gnl|LJGI|TC76166 
          Length = 733

 Score =  323 bits (163), Expect = 3e-88
 Identities = 191/199 (95%), Gaps = 1/199 (0%)
 Strand = Plus / Plus

                                                                       
Query: 36  cagagaaaaagtgcttgtgacaaaaaccaagccttatgtgtcatttataggtaaaagaaa 95
           ||||||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagagaaaaagtgctggtcccaaaaaccaagccttatgtatcatt-ataggtaaaagaaa 506

                                                                       
Query: 96  tcaaacagcaagtgttgtgattacttggaatagcaagtcatcagataaaggtccaaatgg 155
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcaaacagcacgtgttgtgattacttggaatagcaagtcatcagataaaggtccaaatgg 566

                                                                       
Query: 156 catagcattaggcacttatggctcagcaactgtagcagtagaatcagattatttttgtgc 215
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ccaagcattaggcacttatggctcagcaactgtagcagtagaatcagattatttttgtgc 626

                              
Query: 216 aactgagatcacttttgag 234
           |||||||||||||||||||
Sbjct: 627 aactgagatcacttttgag 645


>gnl|LJGI|GO015023 weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (41%)
          Length = 880

 Score =  250 bits (126), Expect = 3e-66
 Identities = 142/146 (97%), Gaps = 1/146 (0%)
 Strand = Plus / Minus

                                                                       
Query: 89  aaagaaatcaaacagcaagtgttgtgattacttggaatagcaagtcatcagataaaggtc 148
           ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 880 aaagaaatcaaacagcacgtgttgtgat-acttggaatagcaagtcatcagataaaggtc 822

                                                                       
Query: 149 caaatggcatagcattaggcacttatggctcagcaactgtagcagtagaatcagattatt 208
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 caaatggccaagcattaggcacttatggctcagcaactgtagcagtagaatcagattatt 762

                                     
Query: 209 tttgtgcaactgagatcacttttgag 234
           ||||||||||||||||||||||||||
Sbjct: 761 tttgtgcaactgagatcacttttgag 736