Miyakogusa Predicted Gene
- Lj0g3v0081919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0081919.1 Non Chatacterized Hit- tr|B9STU6|B9STU6_RICCO
Mom(Plant), putative OS=Ricinus communis
GN=RCOM_05439,47.92,0.00000000000001,seg,NULL; SNF2_N,SNF2-related;
P-loop containing nucleoside triphosphate hydrolases,NULL; SUBFAMILY
,gene.g6069.t1.1
(2139 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP052275 767 0.0
gnl|LJGI|DC597682 similar to UniRef100_A8IVE5 Cluster: SNF2 fami... 545 e-154
>gnl|LJGI|BP052275
Length = 444
Score = 767 bits (387), Expect = 0.0
Identities = 438/447 (97%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 266 tatgggaaacagaattcttacatttggcaccatctgccaatcttgtagtttacaagggaa 325
||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 1 tatgggaaacagaat-cttacatt-ggcaccatctgccaatct-gtagtttagaagggaa 57
Query: 326 acaaagatgtacggagttgcatcagggcattagagttttataatgaagatggtgggatct 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 acaaagatgtacggagttgcatcagggcattagagttttataatgaagatggtgggatct 117
Query: 386 tatttcaaatattattgtcatcttctgatattatcgttgaggacttacatgaactaagat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tatttcaaatattattgtcatcttctgatattatcgttgaggacttacatgaactaagat 177
Query: 446 gcatttcatgggaagcaat-aataattgatg-aatgccagcgatccaaaagtttaagtca 503
||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct: 178 gcatttcatgggaagcaatcaataatggatgcaatgccagcgatccaaaagtttaagtca 237
Query: 504 tattgactatatcaggactctagcagctgagatgaggcttcttctcgttagcggacaaat 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tattgactatatcaggactctagcagctgagatgaggcttcttctcgttagcggacaaat 297
Query: 564 caaggaagatcgggctgattatatcaaactgctttcattcctcaagtctggacatcatag 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caaggaagatcgggctgattatatcaaactgctttcattcctcaagtctggacatcatag 357
Query: 624 gttaaatattgctcaaatggagacttacttctctgctagtatttccaatttgaagagcca 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttaaatattgctcaaatggagacttacttctctgctagtatttccaatttgaagagcca 417
Query: 684 attgaaacaat-atgttgcatataagt 709
|| |||||||| |||||||||||||||
Sbjct: 418 atagaaacaatcatgttgcatataagt 444
>gnl|LJGI|DC597682 similar to UniRef100_A8IVE5 Cluster: SNF2 family
chromodomain-helicase; n=1; Chlamydomonas
reinhardtii|Rep: SNF2 family, partial (0%)
Length = 577
Score = 545 bits (275), Expect = e-154
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 22 gagagaaaagcttctcttgctgaattatcagtgccagcatctggagatttaccaggactt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gagagaaaagcttctcttgctgaattatcagtgccagcatctggagatttaccaggactt 362
Query: 82 tataaccagcatttgagttatgtgaccaagcttcacatgtgttggcacaaaggacagaat 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tataaccagcatttgagttatgtgaccaagcttcacatgtgttggcacaaaggacagaat 422
Query: 142 gctcttattttagaggatcaaattgaccaggagcgggttatgaaggtgattttgtttata 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gctcttattttagaggatcaaattgaccaggagcgggttatgaaggtgattttgtttata 482
Query: 202 ctatctttgaatcataatgtgaagaggccttttctcatcatcacaacttcttctggcctc 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctatctttgaatcataatgtgaagaggccttttctcatcatcacaacttcttctggcctc 542
Query: 262 actgtatgggaaacagaattcttacatttggcacc 296
|||||||||||||||||||||||||||||||||||
Sbjct: 543 actgtatgggaaacagaattcttacatttggcacc 577