Miyakogusa Predicted Gene

Lj0g3v0081769.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0081769.1 Non Chatacterized Hit- tr|K4D407|K4D407_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,35,7e-19,Exostosin,Exostosin-like; EXOSTOSIN (HEPARAN SULFATE
GLYCOSYLTRANSFERASE)-RELATED,NULL; seg,NULL,CUFF.4247.1
         (693 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025815 similar to UniRef100_A4Q7M7 Cluster: Exostosin...    82   5e-15

>gnl|LJGI|GO025815 similar to UniRef100_A4Q7M7 Cluster: Exostosin-like; n=1; Medicago
           truncatula|Rep: Exostosin-like - Medicago truncatula
           (Barrel medic), partial (16%)
          Length = 683

 Score = 81.8 bits (41), Expect = 5e-15
 Identities = 164/205 (80%)
 Strand = Plus / Plus

                                                                       
Query: 335 caaaagggtccatttacagaaatccatactcttttcaccagagccatgtggagatggtga 394
           ||||||| |||||||||   |||||| |  ||||||| ||||| ||  |||| ||| |||
Sbjct: 458 caaaaggatccatttacttgaatccacaagcttttcatcagagtcacatggaaatgatga 517

                                                                       
Query: 395 agagattgaaggtttgggtttacgaggaaggagagcaaccactagtgcatgatgggccat 454
           ||||||| ||||| ||||| ||| ||||||||||||||||| |  |||||||||| ||  
Sbjct: 518 agagattcaaggtgtgggtatacaaggaaggagagcaaccattgatgcatgatggacctg 577

                                                                       
Query: 455 taggcaccatatacgccattgatggtcaattcattgacgaaatcgacagaagcagaaata 514
           ||  || || |||  | ||||| |||||||||||||| ||||| |||| ||| |  || |
Sbjct: 578 taaacaacaaatattctattgaaggtcaattcattgatgaaatagacacaagtaacaaga 637

                                    
Query: 515 gccccttcaaggctaggcaccctga 539
           ||||||||| |||||| || |||||
Sbjct: 638 gccccttcatggctagccatcctga 662