Miyakogusa Predicted Gene
- Lj0g3v0081629.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0081629.3 tr|D5ASC0|D5ASC0_RHOCB Phage integrase
OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581
/,30.56,1.7, ,CUFF.4246.3
(327 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80553 553 e-157
gnl|LJGI|FS348330 similar to UniRef100_A8W3P9 Cluster: NADH dehy... 176 5e-44
gnl|LJGI|BP070370 113 7e-25
>gnl|LJGI|TC80553
Length = 466
Score = 553 bits (279), Expect = e-157
Identities = 286/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 atgcttggactgggccatgggaaccatatacaaacctgcatagttgc-tgagataggcag 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 180 atgcttggactgggccatgggaaccatatacaaacctgcatagttgcctgagataggcag 239
Query: 60 gcttgacctgtgccatcataatatgatgagaaacttcagctggtggatcaaatttcaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcttgacctgtgccatcataatatgatgagaaacttcagctggtggatcaaatttcaaag 299
Query: 120 tctacaggaaaatcatgctttaaaagggatcagctatataagaagcaagatgaatagggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctacaggaaaatcatgctttaaaagggatcagctatataagaagcaagatgaatagggt 359
Query: 180 tctagagactggatttttcccatttcacggcttagatgttaaatataaaaaatcccacat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctagagactggatttttcccatttcacggcttagatgttaaatataaaaaatcccacat 419
Query: 240 aagctcacttattcttaatctgacattatacttggtgaaattcaaca 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aagctcacttattcttaatctgacattatacttggtgaaattcaaca 466
>gnl|LJGI|FS348330 similar to UniRef100_A8W3P9 Cluster: NADH dehydrogenase 2; n=1;
Drosophila willistoni|Rep: NADH dehydrogenase 2 -
Drosophila willistoni (Fruit fly), partial (17%)
Length = 714
Score = 176 bits (89), Expect = 5e-44
Identities = 173/202 (85%), Gaps = 18/202 (8%)
Strand = Plus / Plus
Query: 127 gaaaatcatgctttaaaagggatcagctatataagaagcaagatgaatagggtt-ctaga 185
|||||||||||||| ||||||| |||||||||||||||||||||||| ||| || |||||
Sbjct: 378 gaaaatcatgcttttaaagggagcagctatataagaagcaagatgaaaaggatttctaga 437
Query: 186 gactggatttttcccatttcacggcttagatgttaaatataaaaaatcccacataagctc 245
||||| | |||| |||||||||||||||||||||||||||| |||
Sbjct: 438 gactgaacttttg---------------gatgttaaatataaaaaatcccacataatctc 482
Query: 246 acttattcttaatctgacattatacttggtgaaattcaacaatttctgcatcttgggatg 305
| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 483 agttattcttaatctgacattata--tggtgaaattcaacaatttctgcatcttgggatg 540
Query: 306 gacgttcatgcccatgaactaa 327
|||||||| |||||||| ||||
Sbjct: 541 gacgttcaagcccatgagctaa 562
Score = 151 bits (76), Expect = 3e-36
Identities = 116/128 (90%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 1 atgcttggactgggccatgggaaccatatacaaa-cctgcatagttgctgagataggcag 59
|||||||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||
Sbjct: 148 atgcttggactgtgccataggaaccatatacaaaacctgcatagttgctgaaattggcag 207
Query: 60 gcttgacctgtgccatcataatatgatgagaaacttcagctggtggatcaaatttcaaag 119
||||||| |||| ||||| |||||||| |||||||||||||||||||||| |||| | ||
Sbjct: 208 gcttgacttgtgtcatcagaatatgataagaaacttcagctggtggatcagattttagag 267
Query: 120 tctacagg 127
||||||||
Sbjct: 268 tctacagg 275
>gnl|LJGI|BP070370
Length = 399
Score = 113 bits (57), Expect = 7e-25
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 atgcttggactgggccatgggaaccatatacaaa-cctgcatagttgctgagataggcag 59
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 149 atgctgggactgggccatgggaaccatatacaaaacctgcatagttgctgagataggcag 208
Query: 60 gcttgacct 68
|||||||||
Sbjct: 209 gcttgacct 217