Miyakogusa Predicted Gene

Lj0g3v0081459.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0081459.3 tr|I1L4X3|I1L4X3_SOYBN Ubiquitin
carboxyl-terminal hydrolase (Fragment) OS=Glycine max PE=3
SV=1,65.83,0,UCH_2_3,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; seg,NULL; Cysteine proteinases,NULL;,CUFF.4229.3
         (642 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69611 similar to UniRef100_A7PC87 Cluster: Ubiquitin ...   317   5e-86

>gnl|LJGI|TC69611 similar to UniRef100_A7PC87 Cluster: Ubiquitin carboxyl-terminal
           hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
           carboxyl-terminal hydrolase - Vitis vinifera (Grape),
           partial (5%)
          Length = 524

 Score =  317 bits (160), Expect = 5e-86
 Identities = 163/164 (99%)
 Strand = Plus / Plus

                                                                       
Query: 479 ccagtgtatccggagatgaagtcttgtctcaagaagcatacatcctggtttatgcacgac 538
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   ccagtgtatccggagatgaagtcttgtctcaagaagcatacatcctgttttatgcacgac 60

                                                                       
Query: 539 aaggaacaccatggttttcgagtattatggaggatgtaaactcatcatatcaacactcag 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaggaacaccatggttttcgagtattatggaggatgtaaactcatcatatcaacactcag 120

                                                       
Query: 599 gttcaggcaacaaaggtgattgtggtggtaatgaacaaatggaa 642
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcaggcaacaaaggtgattgtggtggtaatgaacaaatggaa 164