Miyakogusa Predicted Gene

Lj0g3v0081379.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0081379.1 tr|B9PE70|B9PE70_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_586182 PE=4
SV=1,70,2e-18,seg,NULL,CUFF.4217.1
         (219 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75025 similar to UniRef100_A7Q7A3 Cluster: Chromosome...   133   5e-31

>gnl|LJGI|TC75025 similar to UniRef100_A7Q7A3 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 648

 Score =  133 bits (67), Expect = 5e-31
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctccagcctgaggtaaaatctcgagcaatggaaattgctaagttgattgagaatgaa 60
           ||||||||||| ||||| |||||||| |  |||  ||||||||||||| | ||||| |||
Sbjct: 514 atgctccagccagaggtgaaatctcgggtgatgttaattgctaagttggtcgagaacgaa 573

                                                                       
Query: 61  gatggtgttactgctgcagttgatgcatttcaccgccatctaccaactcagctaccactg 120
           ||||||||| |||| ||||||||||||||||| |||||||||||   | |||||||||||
Sbjct: 574 gatggtgttgctgccgcagttgatgcatttcatcgccatctacctgatgagctaccactg 633

                          
Query: 121 ccaactccatctcca 135
           |||||||||||||||
Sbjct: 634 ccaactccatctcca 648