Miyakogusa Predicted Gene
- Lj0g3v0081319.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0081319.1 Non Chatacterized Hit- tr|I0Z8I0|I0Z8I0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.91,8e-19,seg,NULL,CUFF.4210.1
(801 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82718 weakly similar to UniRef100_A7QCD5 Cluster: Chr... 398 e-110
>gnl|LJGI|TC82718 weakly similar to UniRef100_A7QCD5 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (55%)
Length = 1301
Score = 398 bits (201), Expect = e-110
Identities = 339/385 (88%)
Strand = Plus / Plus
Query: 5 ccgccctcggcatcacccccaacgaggcctccattgccaccgtcgccaggctcgccgcgg 64
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 386 ccgccctcggcatcacccctaacgaggcctccatcgccaccgtcgccaggctcgccgcgg 445
Query: 65 ccaagggcgacgctagttacgccttcgacctcgcgaagaacgtcggaaattacagcgtcg 124
||||||| || | | ||||||||||||| ||||||||||| || || || || | || |
Sbjct: 446 ccaagggggatggtggttacgccttcgagctcgcgaagaatgtggggaagtataatgttg 505
Query: 125 ccccgaggctgcggacctatgaccccgcgctgttttgcttctgcgaaaggcttgatgccg 184
||||||||||||||||||||||||| || |||| ||||||||||| || ||||||| |
Sbjct: 506 ccccgaggctgcggacctatgacccggcattgttctgcttctgcgagagccttgatgatg 565
Query: 185 atatggcgtacgaggtggaggagcacatgaagggagttggggttgttttggaggaaccgg 244
||| |||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 566 atagggcgtatgaggtggaggagcatatgaagggggttggggtttgtttggaggaaccgg 625
Query: 245 agctcgccgcgcttttgaaggtgagcgcgaagagggggagaggggagaaggtttatgagt 304
| |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 626 aactcgccgcgcttttgaaggtcagtgtgaagagggggagaggggagaaggtttatgagt 685
Query: 305 acctgcacaagctcaggagtgcggtgagttgcgtcggggaatcgacggcggtggttattg 364
| | |||||||| |||||||||||||| |||| |||||| || || |||| |||||| |
Sbjct: 686 atttacacaagctgaggagtgcggtgaggtgcgccggggagtcaaccgcggcggttatcg 745
Query: 365 aggagtggtttcggggcggcgaggc 389
|||||||||||||| |||| |||||
Sbjct: 746 aggagtggtttcggagcggggaggc 770
Score = 325 bits (164), Expect = 2e-88
Identities = 245/272 (90%)
Strand = Plus / Plus
Query: 522 tgatgatggtggagtttgtggcggctgcggcgagcgattggcttgtgtggatattgatga 581
||||| || |||||||||||| ||||| || |||| ||||||||||||||||||||||||
Sbjct: 897 tgatggtgatggagtttgtggtggctgtggtgagcaattggcttgtgtggatattgatga 956
Query: 582 tgaggacgtggagaagtttggaaagtctattgctgccttggctgtgggacgagaggtcaa 641
|||||| ||||||||||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 957 tgaggagatggagaagtttggcaagtctattgctgccttggcggtggagcgagaggtcaa 1016
Query: 642 ggcaaatttcagtgaatttcaggcatggcttgaaaagcacacccattatgaagctattgt 701
||||||||||||||||||||||| |||||| ||||| || | |||||||||||||||||
Sbjct: 1017 ggcaaatttcagtgaatttcagggatggctagaaaaacatgctcattatgaagctattgt 1076
Query: 702 ggatggtgccaatgttgggctctaccagcaaaattttgcggacggtggatttagcacttg 761
||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1077 ggatggtgcaaatgttgggctctaccagcaaaattttgctgatggtggatttagcactca 1136
Query: 762 tcagcttgacggtgttgtgaaagagctgtaca 793
||||||| ||| ||||||||| || |||||||
Sbjct: 1137 tcagcttcacgatgttgtgaatgaactgtaca 1168