Miyakogusa Predicted Gene
- Lj0g3v0080979.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0080979.2 Non Chatacterized Hit- tr|B9RSM2|B9RSM2_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus
communis,34.08,7e-19,coiled-coil,NULL,CUFF.4175.2
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP075118 similar to UniRef100_A7PAL1 Cluster: Chromosom... 531 e-150
gnl|LJGI|DC594957 214 5e-55
gnl|LJGI|TC64870 weakly similar to UniRef100_A7PAL1 Cluster: Chr... 176 1e-43
gnl|LJGI|TC79678 157 1e-37
gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chr... 66 3e-10
>gnl|LJGI|BP075118 similar to UniRef100_A7PAL1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 341
Score = 531 bits (268), Expect = e-150
Identities = 297/304 (97%), Gaps = 2/304 (0%)
Strand = Plus / Minus
Query: 205 tctcctcttgtgcttaaggattt-ccctgtagaaatgc-tcaatgaaggcctctctgggt 262
|||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 341 tctcctcttgtgctcaaggatttaccctgtagaaatgcatcaatgaaggcctctctgggt 282
Query: 263 attgtaacttgagtttgtgtgacaagcttagactcctaactttcatctgtgatgaagttc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 attgtaacttgagtttgtgtgacaagcttagactcctaactttcatctgtgatgaagttc 222
Query: 323 ttaactcagagaaagtgaggagtcatattgaaaaggaaaatttaaatattgagaagcaga 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ttaactcagagaaagtgaggagtcatattgaaaaggaaaatttaaatattgagaagcaga 162
Query: 383 ggaaagaagccaaagctctatttgcggttgcgaaggaaaagaatttgctggaagagacag 442
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ggaaagaagccaagcctctatttgcggttgcgaaggaaaagaatttgctggaagagacag 102
Query: 443 ccaaaactgttcattcaaatggggatcctgggtcatcgacagagcaagatgctgttgtcc 502
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 101 cccaaactgttcattcaaatggggatcctgggtcatcgacagagccagatgctgttgtcc 42
Query: 503 tgaa 506
||||
Sbjct: 41 tgaa 38
>gnl|LJGI|DC594957
Length = 507
Score = 214 bits (108), Expect = 5e-55
Identities = 123/128 (96%)
Strand = Plus / Plus
Query: 5 aggaaggggaagcagagactattttgcgagaactagttcgcaaacaaaacttgcgcagtg 64
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 145 aggaaggggaagcaaagactattttgcgagaactagatcgcaaacaaaacttgcgcagtg 204
Query: 65 gagagaacaccttagctgttgagttccagactagacttttgaccctgctccgcaccgctt 124
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gagagaacaccctagctgttgagttccaaactagacttttgaccctgctccgcaccgctg 264
Query: 125 caggacat 132
||||||||
Sbjct: 265 caggacat 272
Score = 159 bits (80), Expect = 2e-38
Identities = 122/136 (89%)
Strand = Plus / Plus
Query: 135 gtctccatccttaactacaatagatgggaactgttcatggttgaatgctctgggggattt 194
||||||||||||| ||||| ||||||||||| ||| |||||||| ||||| ||||||||
Sbjct: 372 gtctccatccttagctacagcagatgggaacttttcctggttgaaagctctaggggattt 431
Query: 195 aactttacaatctcctcttgtgcttaaggatttccctgtagaaatgctcaatgaaggcct 254
| ||||||||||||||||| | || ||||||||||| ||| |||||||||||||||| ||
Sbjct: 432 agctttacaatctcctcttcttctcaaggatttccccgtaaaaatgctcaatgaagggct 491
Query: 255 ctctgggtattgtaac 270
||||||||||||||||
Sbjct: 492 ctctgggtattgtaac 507
>gnl|LJGI|TC64870 weakly similar to UniRef100_A7PAL1 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 713
Score = 176 bits (89), Expect = 1e-43
Identities = 252/313 (80%), Gaps = 35/313 (11%)
Strand = Plus / Plus
Query: 329 cagagaaagtgaggagtcatattgaaaaggaaaatttaaatattgagaagcagaggaaag 388
||||||||||||||||| | |||||||||||||||| ||| |||||||||||| ||||||
Sbjct: 1 cagagaaagtgaggagttacattgaaaaggaaaattcaaa-attgagaagcagtggaaag 59
Query: 389 aagccaaagctctatttgcggttgcgaaggaaaag------------------aatttgc 430
||||||||||| |||||||| ||||||||||||| || |||
Sbjct: 60 aagccaaagctgaatttgcggctgcgaaggaaaaggtgaatagcttgaaacagaagctgc 119
Query: 431 tggaagagacagccaaaactgttcattcaaatggggatcctgggtcatcgacagagcaag 490
|||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||
Sbjct: 120 aggaagagacagcaaaaagaattcattccagtggggatcctgggtcatcgacagagcaag 179
Query: 491 atgctgttgtcctga----------------agttgctcaagctcacagtgagatgctcg 534
|||||| |||||||| ||||||||||||||||||||| ||||| |
Sbjct: 180 atgctgctgtcctgaagttgttaacaactgaagttgctcaagctcacagtgaaatgcttg 239
Query: 535 aggctaagggcaggattcctaaaaggaaaatttatgatgctacgaggaattagcctcagt 594
||||||||| | |||||||||||||||||||| |||||||||||||| | ||||||| |
Sbjct: 240 aggctaaggaaaagattcctaaaaggaaaatttctgatgctacgaggattgagcctcact 299
Query: 595 ttgtggatggtag 607
|||||||||||||
Sbjct: 300 ttgtggatggtag 312
>gnl|LJGI|TC79678
Length = 669
Score = 157 bits (79), Expect = 1e-37
Identities = 232/291 (79%), Gaps = 34/291 (11%)
Strand = Plus / Plus
Query: 351 tgaaaaggaaaatttaaatattgagaagcagaggaaagaagccaaagctctatttgcggt 410
|||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1 tgaaaaggaaaattcaaaaattgagaagcagtggaaagaagccaaagctgaatttgcggc 60
Query: 411 tgcgaaggaaaag------------------aatttgctggaagagacagccaaaactgt 452
||||||||||||| || ||| |||||||||||| |||| |
Sbjct: 61 tgcgaaggaaaagttgaatagcttgaaacagaagctgcaggaagagacagcaaaaagaat 120
Query: 453 tcattcaaatggggatcctgggtcatcgacagagcaagatgctgttgtcctga------- 505
|||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tcattccagtggggatcctgggtcatcgacagagcaagatgctgctgtcctgaagttgtt 180
Query: 506 ---------agttgctcaagctcacagtgagatgctcgaggctaagggcaggattcctaa 556
||||||||||||||||||||| ||||| |||||||||| | |||||||||
Sbjct: 181 aacaactgaagttgctcaagctcacagtgaaatgcttgaggctaaggaaaagattcctaa 240
Query: 557 aaggaaaatttatgatgctacgaggaattagcctcagtttgtggatggtag 607
||||||||||| |||||||||||||| | ||||||| ||||||||||||||
Sbjct: 241 aaggaaaatttctgatgctacgaggattgagcctcactttgtggatggtag 291
>gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 492
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atggaggaaggggaagcagagactattttgcga 33
|||||||||||||||||||||||||||||||||
Sbjct: 460 atggaggaaggggaagcagagactattttgcga 492