Miyakogusa Predicted Gene
- Lj0g3v0080839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0080839.1 Non Chatacterized Hit- tr|I3T2G7|I3T2G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.14,0,Alpha-L
RNA-binding motif,NULL; 40S RIBOSOMAL PROTEIN S9,NULL; 30S 40S
RIBOSOMAL PROTEIN,Ribosomal p,CUFF.4190.1
(351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64838 homologue to UniRef100_A7PMS9 Cluster: Chromoso... 696 0.0
gnl|LJGI|TC70731 homologue to UniRef100_A7PMS9 Cluster: Chromoso... 521 e-148
gnl|LJGI|TC65242 homologue to UniRef100_A7PMS9 Cluster: Chromoso... 349 7e-96
gnl|LJGI|BW594588 homologue to UniRef100_A7PMS9 Cluster: Chromos... 329 7e-90
gnl|LJGI|BW599906 homologue to UniRef100_A7PMS9 Cluster: Chromos... 244 3e-64
gnl|LJGI|BW599445 homologue to UniRef100_A7PMS9 Cluster: Chromos... 222 1e-57
gnl|LJGI|BW598912 homologue to UniRef100_A7PMS9 Cluster: Chromos... 212 1e-54
gnl|LJGI|TC82639 homologue to UniRef100_A7PMS9 Cluster: Chromoso... 167 6e-41
gnl|LJGI|BW595167 homologue to UniRef100_A7PMS9 Cluster: Chromos... 82 3e-15
gnl|LJGI|BW597560 similar to UniRef100_Q6H8J2 Cluster: 40S ribos... 56 1e-07
>gnl|LJGI|TC64838 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 862
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 1 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 371
Query: 61 actgttgagaattttctcgagcgaaggcttcagactcttgtgtttaagtctgggatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actgttgagaattttctcgagcgaaggcttcagactcttgtgtttaagtctgggatggct 431
Query: 121 aagtcgattcatcatgctagggttcttatcagacagaggcatatcagggttggaaggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aagtcgattcatcatgctagggttcttatcagacagaggcatatcagggttggaaggcag 491
Query: 181 gtggtgaacattccatctttcatggtgagggttgactcacagaagcatattgacttttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtggtgaacattccatctttcatggtgagggttgactcacagaagcatattgacttttca 551
Query: 241 ctcaccagtcctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctcaccagtcctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggct 611
Query: 301 gctgctaagaaggcctctggtggagatggtgatgaggaagatgaggactaa 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gctgctaagaaggcctctggtggagatggtgatgaggaagatgaggactaa 662
>gnl|LJGI|TC70731 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (51%)
Length = 526
Score = 521 bits (263), Expect = e-148
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 89 ttcagactcttgtgtttaagtctgggatggctaagtcgattcatcatgctagggttctta 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttcagactcttgtgtttaagtctgggatggctaagtcgattcatcatgctagggttctta 168
Query: 149 tcagacagaggcatatcagggttggaaggcaggtggtgaacattccatctttcatggtga 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tcagacagaggcatatcagggttggaaggcaggtggtgaacattccatctttcatggtga 228
Query: 209 gggttgactcacagaagcatattgacttttcactcaccagtcctcttggtggtggacgcc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gggttgactcacagaagcatattgacttttcactcaccagtcctcttggtggtggacgcc 288
Query: 269 ccggaagagtgaagcgaaagaaccaaaaggctgctgctaagaaggcctctggtggagatg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccggaagagtgaagcgaaagaaccaaaaggctgctgctaagaaggcctctggtggagatg 348
Query: 329 gtgatgaggaagatgaggactaa 351
|||||||||||||||||||||||
Sbjct: 349 gtgatgaggaagatgaggactaa 371
>gnl|LJGI|TC65242 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 890
Score = 349 bits (176), Expect = 7e-96
Identities = 302/344 (87%)
Strand = Plus / Plus
Query: 1 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 60
||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 302 atgttccgttatgggcttcttgatgagacccagaacaagcttgattatgtgctcgctctt 361
Query: 61 actgttgagaattttctcgagcgaaggcttcagactcttgtgtttaagtctgggatggct 120
||||||||||| ||||||||||| | || || || || || || |||||||| ||||||
Sbjct: 362 actgttgagaactttctcgagcgccgcctgcaaaccctggttttcaagtctggtatggct 421
Query: 121 aagtcgattcatcatgctagggttcttatcagacagaggcatatcagggttggaaggcag 180
||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 422 aagtctattcatcatgctagggttctcatcaggcagaggcacatcagggttgggaggcag 481
Query: 181 gtggtgaacattccatctttcatggtgagggttgactcacagaagcatattgacttttca 240
|| |||||||| ||||| |||||||||||| | || |||||||| || ||||||||||||
Sbjct: 482 gttgtgaacatcccatcattcatggtgaggatggattcacagaaacacattgacttttca 541
Query: 241 ctcaccagtcctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggct 300
||||| ||||||||||||||||| ||||| ||| | ||||||||||||||| ||||||
Sbjct: 542 ctcacaagtcctcttggtggtggtcgcccaggacgtgtgaagcgaaagaacatgaaggct 601
Query: 301 gctgctaagaaggcctctggtggagatggtgatgaggaagatga 344
||||| |||||||| ||||||| || ||||||||||| |||||
Sbjct: 602 gctgccaagaaggctgctggtggcgacggtgatgaggaggatga 645
>gnl|LJGI|BW594588 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (77%)
Length = 486
Score = 329 bits (166), Expect = 7e-90
Identities = 277/314 (88%)
Strand = Plus / Plus
Query: 1 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 60
||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 167 atgttccgttatgggcttcttgatgagacccagaacaagcttgattatgtgctcgctctt 226
Query: 61 actgttgagaattttctcgagcgaaggcttcagactcttgtgtttaagtctgggatggct 120
||||||||||| ||||||||||| | || || || || || || |||||||| ||||||
Sbjct: 227 actgttgagaactttctcgagcgccgcctgcaaaccctggttttcaagtctggtatggct 286
Query: 121 aagtcgattcatcatgctagggttcttatcagacagaggcatatcagggttggaaggcag 180
||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 287 aagtctattcatcatgctagggttctcatcaggcagaggcacatcagggttgggaggcag 346
Query: 181 gtggtgaacattccatctttcatggtgagggttgactcacagaagcatattgacttttca 240
|| |||||||| ||||| |||||||||||| | || |||||||| || ||||||||||||
Sbjct: 347 gttgtgaacatcccatcattcatggtgaggatggattcacagaaacacattgacttttca 406
Query: 241 ctcaccagtcctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggct 300
||||| ||||||||||||||||| ||||| ||| | ||||||||||||||| ||||||
Sbjct: 407 ctcacaagtcctcttggtggtggtcgcccaggacgtgtgaagcgaaagaacatgaaggct 466
Query: 301 gctgctaagaaggc 314
||||| ||||||||
Sbjct: 467 gctgccaagaaggc 480
>gnl|LJGI|BW599906 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 471
Score = 244 bits (123), Expect = 3e-64
Identities = 210/239 (87%)
Strand = Plus / Plus
Query: 106 aagtctgggatggctaagtcgattcatcatgctagggttcttatcagacagaggcatatc 165
|||||||| ||||||||||| | |||||||||||||||||| ||||| |||||||| |||
Sbjct: 84 aagtctggtatggctaagtctaatcatcatgctagggttctcatcaggcagaggcacatc 143
Query: 166 agggttggaaggcaggtggtgaacattccatctttcatggtgagggttgactcacagaag 225
|||||||| |||||||| |||||||| ||||| |||||||||||| | || ||||||||
Sbjct: 144 agggttgggaggcaggttgtgaacatcccatcattcatggtgaggatggattcacagaaa 203
Query: 226 catattgacttttcactcaccagtcctcttggtggtggacgccccggaagagtgaagcga 285
|| ||||||||||||||||| ||||||||||||||||| ||||| ||| | |||||||||
Sbjct: 204 cacattgacttttcactcacaagtcctcttggtggtggtcgcccaggacgtgtgaagcga 263
Query: 286 aagaaccaaaaggctgctgctaagaaggcctctggtggagatggtgatgaggaagatga 344
|||||| ||||||||||| |||||||| ||||||| || ||||||||||| |||||
Sbjct: 264 aagaacatgaaggctgctgccaagaaggctgctggtggcgacggtgatgaggaggatga 322
>gnl|LJGI|BW599445 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 451
Score = 222 bits (112), Expect = 1e-57
Identities = 190/216 (87%)
Strand = Plus / Plus
Query: 129 tcatcatgctagggttcttatcagacagaggcatatcagggttggaaggcaggtggtgaa 188
|||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||
Sbjct: 78 tcatcatgctagggttctcatcaggcagaggcacatcagggttgggaggcaggttgtgaa 137
Query: 189 cattccatctttcatggtgagggttgactcacagaagcatattgacttttcactcaccag 248
||| ||||| |||||||||||| | || |||||||| || ||||||||||||||||| ||
Sbjct: 138 catcccatcattcatggtgaggatggattcacagaaacacattgacttttcactcacaag 197
Query: 249 tcctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggctgctgctaa 308
||||||||||||||| ||||| ||| | ||||||||||||||| ||||||||||| ||
Sbjct: 198 tcctcttggtggtggtcgcccaggacgtgtgaagcgaaagaacatgaaggctgctgccaa 257
Query: 309 gaaggcctctggtggagatggtgatgaggaagatga 344
|||||| ||||||| || ||||||||||| |||||
Sbjct: 258 gaaggctgctggtggcgacggtgatgaggaggatga 293
>gnl|LJGI|BW598912 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 475
Score = 212 bits (107), Expect = 1e-54
Identities = 188/215 (87%)
Strand = Plus / Plus
Query: 130 catcatgctagggttcttatcagacagaggcatatcagggttggaaggcaggtggtgaac 189
||||||||||||||||| ||||| |||||||| |||| |||||| |||||||| ||||||
Sbjct: 93 catcatgctagggttctcatcaggcagaggcacatcaaggttgggaggcaggttgtgaac 152
Query: 190 attccatctttcatggtgagggttgactcacagaagcatattgacttttcactcaccagt 249
|| ||||| |||||||||||| | || |||||||| || ||||||||||||||||| |||
Sbjct: 153 atcccatcattcatggtgaggatggattcacagaaacacattgacttttcactcacaagt 212
Query: 250 cctcttggtggtggacgccccggaagagtgaagcgaaagaaccaaaaggctgctgctaag 309
|||||||||||||| ||||| ||| | ||||||||||||||| ||||||||||| |||
Sbjct: 213 cctcttggtggtggtcgcccaggacgtgtgaagcgaaagaacatgaaggctgctgccaag 272
Query: 310 aaggcctctggtggagatggtgatgaggaagatga 344
||||| ||||||| || ||||||||||| |||||
Sbjct: 273 aaggctgctggtggcgacggtgatgaggaggatga 307
>gnl|LJGI|TC82639 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (55%)
Length = 874
Score = 167 bits (84), Expect = 6e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atgtttcgttatgggcttcttgatgagactcagaacaagcttgattatgttcttgctctt 850
Query: 61 actgttgagaattttctcgagcga 84
||||||||||||||||||||||||
Sbjct: 851 actgttgagaattttctcgagcga 874
>gnl|LJGI|BW595167 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 291
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 311 aggcctctggtggagatggtgatgaggaagatgaggactaa 351
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aggcctctggtggagatggtgatgaggaagatgaggactaa 45
>gnl|LJGI|BW597560 similar to UniRef100_Q6H8J2 Cluster: 40S ribosomal protein S9; n=1;
Catharanthus roseus|Rep: 40S ribosomal protein S9 -
Catharanthus roseus (Rosy periwinkle) (Madagascar
periwinkle), partial (43%)
Length = 389
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tgggcttcttgatgagactcagaacaagcttgattatgttcttgctcttactgttgagaa 71
|||||||||||||||||| | || | ||||||||||||| | |||| |||||||||||
Sbjct: 270 tgggcttcttgatgagacccggacctagcttgattatgtgcgcgctc-gactgttgagaa 328
Query: 72 ttttctcgagcg 83
|||||||||||
Sbjct: 329 ctttctcgagcg 340