Miyakogusa Predicted Gene

Lj0g3v0080659.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0080659.1 Non Chatacterized Hit- tr|Q7XB80|Q7XB80_ORYSJ
Putative uncharacterized protein OSJNBa0081K20.21
OS=O,67.14,2e-18,DAP3,Ribosomal protein S23/S29,
mitochondrial,CUFF.4162.1
         (216 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63581 similar to UniRef100_Q9FZ46 Cluster: F6I1.13 pr...   428   e-120
gnl|LJGI|TC59470 similar to UniRef100_A7NY54 Cluster: Chromosome...   428   e-120

>gnl|LJGI|TC63581 similar to UniRef100_Q9FZ46 Cluster: F6I1.13 protein; n=1;
           Arabidopsis thaliana|Rep: F6I1.13 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (53%)
          Length = 1351

 Score =  428 bits (216), Expect = e-120
 Identities = 216/216 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtatggtgaaggagtttcaggactccatgcgacctgctctgcttgttcgccagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgggtatggtgaaggagtttcaggactccatgcgacctgctctgcttgttcgccagagc 206

                                                                       
Query: 61  ttcttggatcttcgtgataacttcaggcgcattgttgatcccccattgtggtcacctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttcttggatcttcgtgataacttcaggcgcattgttgatcccccattgtggtcacctcct 266

                                                                       
Query: 121 ggtaaaggcgttaaggctaggaagcaagttgttttggatggtcctgttagctgtgggaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtaaaggcgttaaggctaggaagcaagttgttttggatggtcctgttagctgtgggaag 326

                                               
Query: 181 agcattgcgcttgcgatgctagttcagtgggctcga 216
           ||||||||||||||||||||||||||||||||||||
Sbjct: 327 agcattgcgcttgcgatgctagttcagtgggctcga 362


>gnl|LJGI|TC59470 similar to UniRef100_A7NY54 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 814

 Score =  428 bits (216), Expect = e-120
 Identities = 216/216 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtatggtgaaggagtttcaggactccatgcgacctgctctgcttgttcgccagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgggtatggtgaaggagtttcaggactccatgcgacctgctctgcttgttcgccagagc 492

                                                                       
Query: 61  ttcttggatcttcgtgataacttcaggcgcattgttgatcccccattgtggtcacctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttcttggatcttcgtgataacttcaggcgcattgttgatcccccattgtggtcacctcct 552

                                                                       
Query: 121 ggtaaaggcgttaaggctaggaagcaagttgttttggatggtcctgttagctgtgggaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggtaaaggcgttaaggctaggaagcaagttgttttggatggtcctgttagctgtgggaag 612

                                               
Query: 181 agcattgcgcttgcgatgctagttcagtgggctcga 216
           ||||||||||||||||||||||||||||||||||||
Sbjct: 613 agcattgcgcttgcgatgctagttcagtgggctcga 648