Miyakogusa Predicted Gene

Lj0g3v0080579.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0080579.1 tr|J1LL05|J1LL05_9ACTO Transcription-repair
coupling factor OS=Actinomyces sp. ICM47 GN=mfd PE=4 SV=,36.92,1.1,
,gene.Ljchr0_pseudomol_20120828.path1.gene7630.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70201 similar to UniRef100_A7P6P2 Cluster: Chromosome...   317   2e-86
gnl|LJGI|BP062428 similar to UniRef100_A2F3K7 Cluster: Adenylate...   107   4e-23
gnl|LJGI|TC75330 weakly similar to UniRef100_A7PEP3 Cluster: Chr...    50   9e-06

>gnl|LJGI|TC70201 similar to UniRef100_A7P6P2 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 715

 Score =  317 bits (160), Expect = 2e-86
 Identities = 160/160 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   caggctgctaatattggtgtgttgcctgggtttattcattttcactcctcgagtttcatc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 caggctgctaatattggtgtgttgcctgggtttattcattttcactcctcgagtttcatc 354

                                                                       
Query: 64  aacaagaggggttttgttatgaagccgcgtcacaagtcacgtgacaaaaggcgatcaatg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aacaagaggggttttgttatgaagccgcgtcacaagtcacgtgacaaaaggcgatcaatg 414

                                                   
Query: 124 tcaggcaggtgtccaggcacttctgtcacacctgcccaag 163
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcaggcaggtgtccaggcacttctgtcacacctgcccaag 454


>gnl|LJGI|BP062428 similar to UniRef100_A2F3K7 Cluster: Adenylate and Guanylate
           cyclase catalytic domain containing protein; n=1;
           Trichomonas, partial (1%)
          Length = 493

 Score =  107 bits (54), Expect = 4e-23
 Identities = 109/118 (92%), Gaps = 7/118 (5%)
 Strand = Plus / Minus

                                                                       
Query: 4   caggctgctaatattggtgtgttgcctgggtttattcattttcactcct-cgagtttca- 61
           |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| 
Sbjct: 448 caggctgctaatattggtgtgttgcctggtgttattcattttcactcctgcgagtttcan 389

                                                                     
Query: 62  tcaacaaga-ggggttttgtt-atgaagcc-gcgt-cacaagt-cacgtgacaaaagg 114
           ||||||||| ||||||||||| |||||||| |||| ||||||| ||||||||||||||
Sbjct: 388 tcaacaagagggggttttgttgatgaagccggcgtgcacaagtgcacgtgacaaaagg 331


>gnl|LJGI|TC75330 weakly similar to UniRef100_A7PEP3 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (37%)
          Length = 722

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 165 aggattgaaccacggtgggggaagc 189
           |||||||||||||||||||||||||
Sbjct: 30  aggattgaaccacggtgggggaagc 54