Miyakogusa Predicted Gene

Lj0g3v0079939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0079939.1 tr|A4S6J9|A4S6J9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_88968,37.33,2e-18,seg,NULL; UNCHARACTERIZED,NULL,CUFF.4110.1
         (930 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW628411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int...   700   0.0  

>gnl|LJGI|BW628411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
           protein-like; n=1; Oryza sativa Japonica Group|Rep:
           LMBR1 integral membrane protein-like - Oryza sativa
           subsp. japonica (Rice), partial (19%)
          Length = 486

 Score =  700 bits (353), Expect = 0.0
 Identities = 381/395 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtatatgtgtgtctgcacgtatttttccttgtttaaaatgggaacgatgatgttttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  atgtatatgtgtgtctgcacgtatttttccttgtttaaaatgggaacgatgatgttttac 151

                                                                       
Query: 61  tcactaacaccaagacaaactagctcagttagcttgcttatgatatgctcgatggttgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tcactaacaccaagacaaactagctcagttagcttgcttatgatatgctcgatggttgca 211

                                                                       
Query: 121 agatatgcagcaccaatttcgtacaattttctcaatctcattaatcttggtggagatagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 agatatgcagcaccaatttcgtacaattttctcaatctcattaatcttggtggagatagg 271

                                                                       
Query: 181 aaaaccatttttgaaaagaggatgggaaacattgatgatgctgttccnnnnnnngggaaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||       ||||||
Sbjct: 272 aaaaccatttttgaaaagaggatgggaaacattgatgatgctgttcctttttttgggaaa 331

                                                                       
Query: 241 ggttttaacaaaatttaccctgtcatcatggttatatacacctcactaatagctggcaan 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 332 ggttttaacaaaatttaccctgtcatcatggttatatacacctcactaatagctggcaat 391

                                                                       
Query: 301 nnnnnnaaccgtgtcatcacttattgtgggaattggagaatattcaagtttagtgatgat 360
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttttttaaccgtgtcatcacttattgtgggaattggagaatattcaagtttagtgatgat 451

                                              
Query: 361 gcagaagatatggatggatttgacccatctggagt 395
           |||||||||||||||||||||||||||||||||||
Sbjct: 452 gcagaagatatggatggatttgacccatctggagt 486