Miyakogusa Predicted Gene
- Lj0g3v0079889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0079889.1 Non Chatacterized Hit- tr|H3ATW0|H3ATW0_LATCH
Uncharacterized protein (Fragment) OS=Latimeria
chalum,28.69,0.000000000000001,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN,NULL;
seg,NULL,CUFF.4101.1
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63858 similar to UniRef100_A7NXY7 Cluster: Chromosome... 1612 0.0
gnl|LJGI|TC60558 521 e-147
gnl|LJGI|TC67304 similar to UniRef100_A7Q9V6 Cluster: Chromosome... 377 e-103
>gnl|LJGI|TC63858 similar to UniRef100_A7NXY7 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (71%)
Length = 1191
Score = 1612 bits (813), Expect = 0.0
Identities = 825/829 (99%)
Strand = Plus / Plus
Query: 375 gcgtgtgcgtgtggccatgtctgcagaggaccggcgtgcatttgctgctgacaatgttcc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtgtgcgtgtggccatgtctgcagaggaccggcgtgcatttgctgctgacaatgttcc 60
Query: 435 tctggtggctctgcctaatgctattagcggtatccctcgggattcctcttctccgtacgg 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctggtggctctgcctaatgctattagcggtatccctcgggattcctcttctccgtacgg 120
Query: 495 gagattggatgtacagcagattgcaaaatggagtgaacagatactccctttcgccctctt 554
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 121 gagattggatgtacagcagattgcaaaatggggtgaacagatactccctttcgccctctt 180
Query: 555 gttgttgattgttttcgtccgccagcactggcaaggtttctttgtcaccatctgtgtatc 614
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 gttgttgattgttttcgtccgccagcactggcaaggtttctttgtcaccatctgtgcatc 240
Query: 615 agctgtgatgttcaaatcaaatgaaattgttaagaaacagacagctctaaagggagatcg 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctgtgatgttcaaatcaaatgaaattgttaagaaacagacagctctaaagggagatcg 300
Query: 675 gaaagtctctgtacttctcagcatcgcttttgccttcatgttttatgtgatgtgcattta 734
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 gaaagtctctgtacttctcagcatcgcttttgcgttcatgttttatgtgatgtgcattta 360
Query: 735 ttggtggcattgtaatgatgatcttctgtccccactggcaatggttccgccaaaagcaac 794
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 ttggtggcattgtaatgatgatcttctgtccccactggcaatggttccgtcaaaagcaac 420
Query: 795 accaccattttggcacacaatattcattgttttggttaatgatacattggtgaggcaagc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accaccattttggcacacaatattcattgttttggttaatgatacattggtgaggcaagc 480
Query: 855 aacaatggctttcaagtgtttgttgcttatctactacaaagatagcagaggccataattt 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacaatggctttcaagtgtttgttgcttatctactacaaagatagcagaggccataattt 540
Query: 915 ccgtcggcaggctcaaatgttaactctggttgagtacacactgctgttgtatcgggcttt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgtcggcaggctcaaatgttaactctggttgagtacacactgctgttgtatcgggcttt 600
Query: 975 gttgccaacgccagtttggtaccgatttttcttgaacaaggaatatggaagtctcttttc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttgccaacgccagtttggtaccgatttttcttgaacaaggaatatggaagtctcttttc 660
Query: 1035 atcactgaccacaggattgtatctaactttcaaactaacatctgtagttgagaaggtccg 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcactgaccacaggattgtatctaactttcaaactaacatctgtagttgagaaggtccg 720
Query: 1095 gtgtttctttagtgctttaaaagcattatcaaaacatgaagttcattatggggcttatgc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgtttctttagtgctttaaaagcattatcaaaacatgaagttcattatggggcttatgc 780
Query: 1155 aacaatggaacaggtaaatgctgctggtaacctttgcgctatatgccag 1203
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aacaatggaacaggtaaatgctgctggtaacctttgcgctatatgccag 829
>gnl|LJGI|TC60558
Length = 755
Score = 521 bits (263), Expect = e-147
Identities = 303/323 (93%)
Strand = Plus / Plus
Query: 31 ccttcgttgtcgtctaatggaagtggagttgtaaatagtagcagtagtgataataataat 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccttcgttgtcgtctaatggaagtggagttgtaaatagtagcagtagtgataataataat 492
Query: 91 aatagcactgtaaattggtttggggtgagtttgccttttcgttctccggtttcttttgtg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aatagcactgtaaattggtttggggtgagtttgccttttcgttctccggtttcttttgtg 552
Query: 151 attgattactggaacagtagtagtgattctgctgagccggttgttgtgattcctaatccg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 attgattactggaacagtagtagtgattctgctgagccggttgttgtgattcctaatccg 612
Query: 211 cgccctcggtctcggattcaatctgattctggttcnnnnnnnnnnnnnnnnnnnnctgtg 270
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 613 cgccctcggtctcggattcaatctgattctggttctggtggtggtggtggtggtgctgtg 672
Query: 271 gaagtggctataagcattgttgggagaggagatcaattgggaacttcatcatcagagaat 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaagtggctataagcattgttgggagaggagatcaattgggaacttcatcatcagagaat 732
Query: 331 caggtaggggaactagggtgtga 353
|||||||||||||||||||||||
Sbjct: 733 caggtaggggaactagggtgtga 755
>gnl|LJGI|TC67304 similar to UniRef100_A7Q9V6 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 1472
Score = 377 bits (190), Expect = e-103
Identities = 570/696 (81%), Gaps = 3/696 (0%)
Strand = Plus / Plus
Query: 508 cagcagattgcaaaatggagtgaacagatactccctttcgccctcttgttgttgattgtt 567
|||||| | ||||| |||| ||| ||||| || |||||| | ||||||||||||||||||
Sbjct: 149 cagcaggtcgcaaagtggattgagcagattcttcctttctcactcttgttgttgattgtt 208
Query: 568 ttcgtccgccagcactggcaaggtttctttgtcaccatctgtgtatcagctgtgatgttc 627
||| || | ||||| | ||||||||||||||||| || || |||||||||||||||||
Sbjct: 209 ttcatcagacagcatttacaaggtttctttgtcactatttggatatcagctgtgatgttc 268
Query: 628 aaatcaaatgaaattgttaagaaacagacagctctaaagggagatcggaaagtctctgta 687
||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||
Sbjct: 269 aaatcgaatgaaattgttaagaagcagacagctttaaagggagataggaaagtgtctgta 328
Query: 688 cttctcagcatcgcttttgccttcatgttttatgtgatgtgcatttattggtggcattgt 747
||| || | ||| ||||||| ||||| || | || | |||||||| |||||| || |
Sbjct: 329 cttgtcggtatctcttttgctttcattcttcaggtcacatgcatttactggtggtatcga 388
Query: 748 aatgatgatcttctgtccccactggcaatggttccgccaaaagcaacaccaccattttgg 807
||||||||||| | | |||||| ||| |||| || | | | ||||| || |||
Sbjct: 389 aatgatgatctcttatacccactaatcatgcttcctcctagacctacacct---ttctgg 445
Query: 808 cacacaatattcattgttttggttaatgatacattggtgaggcaagcaacaatggctttc 867
|| || ||||||| | ||||| |||||| ||||||| ||||||| |||||| ||||
Sbjct: 446 cattcagtattcatcatcttggtcaatgatgtattggtgcggcaagctgcaatggttttc 505
Query: 868 aagtgtttgttgcttatctactacaaagatagcagaggccataatttccgtcggcaggct 927
|||||||| ||||||| || |||||| || ||| ||| ||||| ||||| |||||||||
Sbjct: 506 aagtgtttcctgcttatatattacaaaaatggcaaaggtcataacttccgccggcaggct 565
Query: 928 caaatgttaactctggttgagtacacactgctgttgtatcgggctttgttgccaacgcca 987
|||||||||||| |||||||||||| |||||||||||||| || || |||||||| |
Sbjct: 566 caaatgttaactttggttgagtacatgctgctgttgtatcgtgccttattgccaacactg 625
Query: 988 gtttggtaccgatttttcttgaacaaggaatatggaagtctcttttcatcactgaccaca 1047
||||||||||| ||||||||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 626 gtttggtaccggtttttcttgaacagagattatggcagtctcttttcgtcactgactaca 685
Query: 1048 ggattgtatctaactttcaaactaacatctgtagttgagaaggtccggtgtttctttagt 1107
|| | ||| |||||||||| ||||||||| | ||||||||||||| | ||| || |
Sbjct: 686 gggctttatttaactttcaagctaacatctatcattgagaaggtccgaggcttcatttct 745
Query: 1108 gctttaaaagcattatcaaaacatgaagttcattatggggcttatgcaacaatggaacag 1167
|| || |||||||| |||| | | || ||||||||||||| |||||| ||||||||||||
Sbjct: 746 gccttcaaagcattgtcaagaaaggatgttcattatggggtttatgctacaatggaacag 805
Query: 1168 gtaaatgctgctggtaacctttgcgctatatgccag 1203
|| ||||||||||| |||| || ||||||||||||
Sbjct: 806 gtcaatgctgctggcgacctatgtgctatatgccag 841