Miyakogusa Predicted Gene
- Lj0g3v0079379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0079379.1 Non Chatacterized Hit- tr|B9RRF5|B9RRF5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.45,0.00000000000002,seg,NULL,CUFF.4074.1
(1329 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63246 weakly similar to UniRef100_A7PAJ4 Cluster: Chr... 704 0.0
gnl|LJGI|FS336050 weakly similar to UniRef100_A7PAJ4 Cluster: Ch... 305 4e-82
gnl|LJGI|TC73849 220 2e-56
gnl|LJGI|FS331061 similar to UniRef100_A7QT64 Cluster: Chromosom... 157 2e-37
gnl|LJGI|TC81909 153 3e-36
gnl|LJGI|TC80487 129 5e-29
gnl|LJGI|BW620203 weakly similar to UniRef100_Q013S1 Cluster: Ch... 121 1e-26
gnl|LJGI|TC74361 70 4e-11
>gnl|LJGI|TC63246 weakly similar to UniRef100_A7PAJ4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 1334
Score = 704 bits (355), Expect = 0.0
Identities = 422/449 (93%)
Strand = Plus / Plus
Query: 849 gcatctggagagaccagggaaaggaaaaagaactatttgcaatgatagtggagttactat 908
||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 469 gcatcaggagaggccagggaaaggaaaaagaactatttgcagtgatagtggagttagtat 528
Query: 909 tgcggctgggaaatcttgcnnnnnnngaagaacggataccctgaacaccaaagatggtgc 968
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 529 tgcggctgggaaatcttgcaaagaaagaagaacggataccccgaacaccaaagatggtgc 588
Query: 969 tctctcttgcctttctggtggtgtcactattgactatcttcctgataataatagttctgg 1028
| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 589 tatctcttgcctttctggtggtgtcactattgactatcttccagataatagtagttctgg 648
Query: 1029 acctgatgctggcatatttaatnnnnnnngatcaaccactggtggttcagatgagaatga 1088
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 649 acctgatgatggcatatttaataaaaaaagatcaaccactggtggttcagatgagaatga 708
Query: 1089 gctgatcaaatctacaactttgtttgttgaagataccccacttgtgccacagacttcaat 1148
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 709 gctgatcaaatctacaactttgtttgttgaagataccccagttgtgccacagacttcaat 768
Query: 1149 agatagaagttctagtgctgaaaagtccaaagattgtgatcagaaaattgagcatgcagc 1208
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agatagaagttctagggctgaaaagtccaaagattgtgatcagaaaattgagcatgcagc 828
Query: 1209 caccactgatcaaaagttatgctccctgacaatcccatgtgacaatttggcctcaggtac 1268
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 829 caccactgatcaaaagttatgctccctgacaatcccatgttacaatttggcctcaggtac 888
Query: 1269 tttgatccctatggatcaagagttgccag 1297
|||| ||||||||||||||||||||||||
Sbjct: 889 tttggtccctatggatcaagagttgccag 917
>gnl|LJGI|FS336050 weakly similar to UniRef100_A7PAJ4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (50%)
Length = 731
Score = 305 bits (154), Expect = 4e-82
Identities = 206/228 (90%)
Strand = Plus / Plus
Query: 849 gcatctggagagaccagggaaaggaaaaagaactatttgcaatgatagtggagttactat 908
||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 504 gcatcaggagaggccagggaaaggaaaaagaactatttgcagtgatagtggagttagtat 563
Query: 909 tgcggctgggaaatcttgcnnnnnnngaagaacggataccctgaacaccaaagatggtgc 968
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcggctgggaaatcttgcaaagaaagaagaacggataccctgaacaccaaagatggtgc 623
Query: 969 tctctcttgcctttctggtggtgtcactattgactatcttcctgataataatagttctgg 1028
| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 624 tatctcttgcctttctggtggtgtcactattgactatcttccagataatagtagttctgg 683
Query: 1029 acctgatgctggcatatttaatnnnnnnngatcaaccactggtggttc 1076
|||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 684 acctgatgatggcatatttaataaaaaaagatcaaccactggtggttc 731
>gnl|LJGI|TC73849
Length = 1271
Score = 220 bits (111), Expect = 2e-56
Identities = 219/255 (85%)
Strand = Plus / Plus
Query: 159 cttcatcgacaccaacctcgatacgcactttgcaaccgacgtttctgtccacgacaccgt 218
|||||||||||||||||||||||| ||||| ||| |||||||| || |||||||||||
Sbjct: 143 cttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgc 202
Query: 219 ctgggacctcaaaaagagaatcaagtcagaacacccttcacagtttcccaaatttgggcc 278
|| |||||||||||||||||| |||||||||||| |||| ||||| |||||||||
Sbjct: 203 ctccgacctcaaaaagagaatcgagtcagaacaccgttcatgctttccggaatttgggca 262
Query: 279 cataaatattcatgcgattaaggttaagcgcaaggggtgcttttatcaactagttgattc 338
|||| || |||||| ||||||||||||||||||||||| || |||||| |||| |||||
Sbjct: 263 catacatgttcatgggattaaggttaagcgcaaggggtactcttatcagctagcagattc 322
Query: 339 catgtgtgtgagagttgcctttaatggttccaagaagagctggttccttagtgttgaggc 398
||||||||||||| |||||||| ||||| ||| |||||||||| | |||||||| |||
Sbjct: 323 catgtgtgtgagaaatgcctttagtggtttcaaaaagagctggtacattagtgttcaggt 382
Query: 399 ttccgcattggggga 413
||| ||||| |||||
Sbjct: 383 ttctgcattagggga 397
Score = 192 bits (97), Expect = 4e-48
Identities = 198/233 (84%), Gaps = 9/233 (3%)
Strand = Plus / Plus
Query: 459 ggtggctagccttgataatttgcagttgcttcagttggagaacaagcagggtgagggtca 518
|||| |||||||||||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 494 ggtgtctagccttgataatttgcagttgcttcagtcagagaacaagctggatgagggtgg 553
Query: 519 aggaattcataatgttagcccgtgtgtttcagaacagactgatagaggagctgttaaaaa 578
||||||||||||||| || || ||||||||||||||||||| ||||| ||| |||||
Sbjct: 554 aggaattcataatgtcagaccctgtgtttcagaacagactggcgaaggagatgtaaaaaa 613
Query: 579 tttgaaggcaagtgttaaattagttggcaataatgaagatgggattccagtgcatggttc 638
|||| || |||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 614 tttggag---------aaatcagctggcaataatgaagatggtattccagtgcatggttc 664
Query: 639 cattccggaggcagaggaacgtgactttgtaaatcgtgaagttctcccaagtt 691
||||| ||||||||||| |||| ||||||||||| ||||||||| |||||||
Sbjct: 665 gattccagaggcagaggagcgtggctttgtaaatcatgaagttcttccaagtt 717
Score = 85.7 bits (43), Expect = 7e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 718 tccgttacaagcattaaggatgtttgcgatgtccgagaggatgatctgccaatatctgtg 777
|||| |||| ||||||||||||||||||| || || |||||||| ||| |||||||||||
Sbjct: 720 tccggtacaggcattaaggatgtttgcgacgtacgtgaggatgacctgtcaatatctgtg 779
Query: 778 ccaagttcaaa 788
|||||||||||
Sbjct: 780 ccaagttcaaa 790
>gnl|LJGI|FS331061 similar to UniRef100_A7QT64 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 808
Score = 157 bits (79), Expect = 2e-37
Identities = 171/203 (84%), Gaps = 9/203 (4%)
Strand = Plus / Plus
Query: 459 ggtggctagccttgataatttgcagttgcttcagttggagaacaagcagggtgagggtca 518
|||| |||||||||||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 615 ggtgtctagccttgataatttgcagttgcttcagtcagagaacaagctggatgagggtgg 674
Query: 519 aggaattcataatgttagcccgtgtgtttcagaacagactgatagaggagctgttaaaaa 578
||||||||||||||| || || ||||||||||||||||||| ||||| ||| |||||
Sbjct: 675 aggaattcataatgtcagaccctgtgtttcagaacagactggcgaaggagatgtaaaaaa 734
Query: 579 tttgaaggcaagtgttaaattagttggcaataatgaagatgggattccagtgcatggttc 638
|||| || |||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 735 tttggag---------aaatcagctggcaataatgaagatggtattccagtgcatggttc 785
Query: 639 cattccggaggcagaggaacgtg 661
||||| ||||||||||| ||||
Sbjct: 786 gattccagaggcagaggagcgtg 808
Score = 101 bits (51), Expect = 1e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 299 aggttaagcgcaaggggtgcttttatcaactagttgattccatgtgtgtgagagttgcct 358
|||||||||||||||||| || |||||| |||| |||||||||||||||||| |||||
Sbjct: 404 aggttaagcgcaaggggtactcttatcagctagcagattccatgtgtgtgagaaatgcct 463
Query: 359 ttaatggttccaagaagagctggttccttagtgttgaggcttccgcattggggga 413
||| ||||| ||| |||||||||| | |||||||| ||| ||| ||||| |||||
Sbjct: 464 ttagtggtttcaaaaagagctggtacattagtgttcaggtttctgcattagggga 518
Score = 75.8 bits (38), Expect = 6e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 159 cttcatcgacaccaacctcgatacgcactttgcaaccgacgtttctgtccacgacaccgt 218
|||||||||||||||||||||||| ||||| ||| |||||||| || |||||||||||
Sbjct: 107 cttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgc 166
Query: 219 ctgggacctcaaaa 232
|| ||||||||||
Sbjct: 167 ctccgacctcaaaa 180
Score = 52.0 bits (26), Expect = 9e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 233 agagaatcaagtcagaacacccttcacagtttcccaaatttgggcccataaatattcatg 292
|||||||| |||||||||||| |||| ||||| ||||||||| |||| || ||||||
Sbjct: 257 agagaatcgagtcagaacaccgttcatgctttccggaatttgggcacatacatgttcatg 316
Query: 293 cgattaaggt 302
|||||||||
Sbjct: 317 ggattaaggt 326
>gnl|LJGI|TC81909
Length = 722
Score = 153 bits (77), Expect = 3e-36
Identities = 244/299 (81%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 160 ttcatcgacaccaacctcgatacgcactttgcaaccgacgtttctgtccacgacaccgtc 219
||||||||||||||||||||||||||||| ||| | ||||| || ||||||||||||
Sbjct: 309 ttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtc 368
Query: 220 tgggacctcaaaaagagaatcaagtcagaacacccttcacagtttcccaaatttgggccc 279
| |||||||||||||||||| |||| |||||||||||| |||||||||||||| | |
Sbjct: 369 tccgacctcaaaaagagaatcgagtccgaacacccttcatgctttcccaaatttggccac 428
Query: 280 ataaatattcatgcgattaaggttaagcgcaaggggtgcttttatcaactagttgattcc 339
|| ||||||||| |||||||||| | |||| || | | ||||| | || ||||||
Sbjct: 429 attcatattcatgggattaaggttcaccgcaccggctacatttatgacctttcagattcc 488
Query: 340 atgtgtgtgagagttgcctttaatggttccaagaagagctggttccttagtgttgaggct 399
|||| ||| | | |||||||||||||| ||| | |||||||||||| ||||||||||
Sbjct: 489 atgtctgtcacaaatgcctttaatggtttcaatgacggctggttccttactgttgaggct 548
Query: 400 tccgcattggg---ggagggtgcaaagagtgaccaattggttcctcatgcttctcctaa 455
|| ||||||| ||||| | || | |||||||||||| || ||||||||||||||||
Sbjct: 549 tcttcattgggggaggaggctacacaaagtgaccaattgattactcatgcttctcctaa 607
>gnl|LJGI|TC80487
Length = 994
Score = 129 bits (65), Expect = 5e-29
Identities = 145/173 (83%), Gaps = 9/173 (5%)
Strand = Plus / Plus
Query: 519 aggaattcataatgttagcccgtgtgtttcagaacagactgatagaggagctgttaaaaa 578
||||||||||||||| || || ||||||||||||||||||| ||||| ||| |||||
Sbjct: 635 aggaattcataatgtcagaccctgtgtttcagaacagactggcgaaggagatgtaaaaaa 694
Query: 579 tttgaaggcaagtgttaaattagttggcaataatgaagatgggattccagtgcatggttc 638
|||| || |||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 695 tttggag---------aaatcagctggcaataatgaagatggtattccagtgcatggttc 745
Query: 639 cattccggaggcagaggaacgtgactttgtaaatcgtgaagttctcccaagtt 691
||||| ||||||||||| |||| ||||||||||| ||||||||| |||||||
Sbjct: 746 gattccagaggcagaggagcgtggctttgtaaatcatgaagttcttccaagtt 798
Score = 93.7 bits (47), Expect = 3e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 718 tccgttacaagcattaaggatgtttgcgatgtccgagaggatgatctgccaatatctgtg 777
|||| |||| ||||||||||||||||||| || || |||||||||||| |||||||||||
Sbjct: 801 tccggtacaggcattaaggatgtttgcgacgtacgtgaggatgatctgtcaatatctgtg 860
Query: 778 ccaagttcaaa 788
|||||||||||
Sbjct: 861 ccaagttcaaa 871
>gnl|LJGI|BW620203 weakly similar to UniRef100_Q013S1 Cluster: Chromosome 08 contig 1,
DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 08
contig 1, DNA sequence - Ostreococcus tauri, partial
(3%)
Length = 442
Score = 121 bits (61), Expect = 1e-26
Identities = 151/181 (83%)
Strand = Plus / Plus
Query: 233 agagaatcaagtcagaacacccttcacagtttcccaaatttgggcccataaatattcatg 292
|||||||| ||||| |||||| |||| ||||| ||||||||| |||| || ||||||
Sbjct: 259 agagaatcgagtcaaaacaccgttcatgctttccggaatttgggcacatacatgttcatg 318
Query: 293 cgattaaggttaagcgcaaggggtgcttttatcaactagttgattccatgtgtgtgagag 352
|||||||||||| |||||||||| || |||||| |||| ||||||||||||||| |
Sbjct: 319 ggattaaggttaaccgcaaggggtactcttatcagctagcaaattccatgtgtgtgaaaa 378
Query: 353 ttgcctttaatggttccaagaagagctggttccttagtgttgaggcttccgcattggggg 412
|||||||| ||||| ||| |||||||||| | |||||||| ||||||| ||||| ||||
Sbjct: 379 atgcctttagtggtttcaaaaagagctggtacattagtgttcaggcttctgcattagggg 438
Query: 413 a 413
|
Sbjct: 439 a 439
Score = 75.8 bits (38), Expect = 6e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 159 cttcatcgacaccaacctcgatacgcactttgcaaccgacgtttctgtccacgacaccgt 218
|||||||||||||||||||||||| ||||| ||| |||||||| || |||||||||||
Sbjct: 109 cttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgc 168
Query: 219 ctgggacctcaaaa 232
|| ||||||||||
Sbjct: 169 ctccgacctcaaaa 182
>gnl|LJGI|TC74361
Length = 648
Score = 69.9 bits (35), Expect = 4e-11
Identities = 88/105 (83%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 354 tgcctttaatggttccaagaagagctggttccttagtgttgaggcttccgcattggggga 413
|||||||||||||| ||| | |||||||||||| |||||||||||| ||||||||||
Sbjct: 86 tgcctttaatggtttcaatgacggctggttccttactgttgaggcttcttcattggggga 145
Query: 414 gggtgcaa---agagtgaccaattggttcctcatgcttctcctaa 455
|| || | | |||||||||||| || ||||||||||||||||
Sbjct: 146 ggaggctacacaaagtgaccaattgattactcatgcttctcctaa 190
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 167 acaccaacctcgatacgcactttgcaaccgacgtttctgtccacgacaccgtctgggacc 226
|||||||||||||||||||||| ||| | ||||| || ||||||||||||| ||||
Sbjct: 1 acaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtctccgacc 60
Query: 227 tcaaaaa 233
|||||||
Sbjct: 61 tcaaaaa 67