Miyakogusa Predicted Gene

Lj0g3v0079209.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0079209.1 tr|C5BGR9|C5BGR9_EDWI9 4Fe-4S binding domain
protein OS=Edwardsiella ictaluri (strain 93-146)
GN=NT0,28.72,3.6,seg,NULL,BP064711.path1.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP064711 homologue to UniRef100_A7R0E9 Cluster: Chromos...   494   e-139

>gnl|LJGI|BP064711 homologue to UniRef100_A7R0E9 Cluster: Chromosome undetermined
           scaffold_306, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_306,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (9%)
          Length = 411

 Score =  494 bits (249), Expect = e-139
 Identities = 308/333 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacatggaactttcaactactcacccatttactacaaccccnnnnnnncgtggaact 60
           ||||||| |||||||||| |||||||||||||||||||||||||       |||||||||
Sbjct: 78  atgaacagggaactttcagctactcacccatttactacaaccccaaaaaaacgtggaact 137

                                                                       
Query: 61  ttcagcttactcttatttatctacaaccccnnnnnnncatgggactttcagctatttatt 120
           ||||||||||||||||||||||||||||||       || ||||||||||||||||||| 
Sbjct: 138 ttcagcttactcttatttatctacaaccccaaaaaaacaggggactttcagctatttatg 197

                                                                       
Query: 121 ggatcacaggattccacaaaacagcttatgtataaccagctacaaaacacacctcactac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggatcacaggattccacaaaacagcttatgtataaccagctacaaaacacacctcactac 257

                                                                       
Query: 181 ttatgcttacattctatcccaataccctgctttgactctgtttcaccatctccaacaacc 240
           ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 258 ttatgcttacattctatcccaatacccggcttggactctgtttcaccatctccaacaacc 317

                                                                       
Query: 241 acatactactcatgtttatattgtgacccagttccctgccttggctctatttcaccatct 300
           ||||||||||||||||||||| |||||||||||||| | || ||||||||||||||||||
Sbjct: 318 acatactactcatgtttatatggtgacccagttcccggnctgggctctatttcaccatct 377

                                            
Query: 301 ccaacaaccatcaccttagttgtctcagcaatt 333
           |||||||||||||||||||| ||||||||||||
Sbjct: 378 ccaacaaccatcaccttagtngtctcagcaatt 410