Miyakogusa Predicted Gene
- Lj0g3v0078789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0078789.1 tr|A4S2E7|A4S2E7_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_33429,31.5,0.000000000000003,SAP30_Sin3_bdg,Histone
deacetylase complex subunit SAP30, Sin3 binding domain; SUBFAMILY NOT
NAMED,N,CUFF.4029.1
(690 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59703 homologue to UniRef100_A7NTI3 Cluster: Chromoso... 654 0.0
gnl|LJGI|TC73144 similar to UniRef100_A7NTI3 Cluster: Chromosome... 628 e-179
gnl|LJGI|TC77224 similar to UniRef100_A7NTI3 Cluster: Chromosome... 607 e-173
gnl|LJGI|DC595811 similar to UniRef100_A7USI0 Cluster: AGAP00031... 159 3e-38
gnl|LJGI|FS347551 homologue to UniRef100_A7NTI3 Cluster: Chromos... 153 2e-36
gnl|LJGI|FS320858 similar to UniRef100_A7QPE0 Cluster: Chromosom... 84 1e-15
>gnl|LJGI|TC59703 homologue to UniRef100_A7NTI3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 738
Score = 654 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus
Query: 1 atgctggaagcaacaatggaaagctcttcagtcaatggtggtggtgatcgattctctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atgctggaagcaacaatggaaagctcttcagtcaatggtggtggtgatcgattctctcag 468
Query: 61 ttgcagagctgtggagatagcagcgaagaagagctctccgtgctccctcgtcacaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttgcagagctgtggagatagcagcgaagaagagctctccgtgctccctcgtcacaccaag 528
Query: 121 gtggttgtcaccggaaacaaccgcaccaaatccgtactcgttggtcttcagggagttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtggttgtcaccggaaacaaccgcaccaaatccgtactcgttggtcttcagggagttgtc 588
Query: 181 aagaaagccgttggcctcggtggttggcattggctggttcttactaatggtattgaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aagaaagccgttggcctcggtggttggcattggctggttcttactaatggtattgaagtg 648
Query: 241 aagctgcagaggaatgcccttagtgtgattgaagcacccaccgggaatgaggaagatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aagctgcagaggaatgcccttagtgtgattgaagcacccaccgggaatgaggaagatgat 708
Query: 301 gaccttgaatttgaaaatacgcagtggaat 330
||||||||||||||||||||||||||||||
Sbjct: 709 gaccttgaatttgaaaatacgcagtggaat 738
>gnl|LJGI|TC73144 similar to UniRef100_A7NTI3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 639
Score = 628 bits (317), Expect = e-179
Identities = 320/321 (99%)
Strand = Plus / Plus
Query: 370 aaatcaaggcacaggacacatagatcattaggatcatctcacaagactacaagcaggtcc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aaatcaaggcacaggacacatagatcattaggatcatctcacaagactacaagcaggtcc 65
Query: 430 ttctctgctgattcccagtctaaaggatcaatttctatgccccatggatggacgaaggtt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttctctgctgattcccagtctaaaggatcaatttctatgccccatggatggacgaaggtt 125
Query: 490 gacttgagcaaattggagatggctgcattgtggagatattggcgacacttcaatctggtg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gacttgagcaaattggagatggctgcattgtggagatattggcgacacttcaatctggtg 185
Query: 550 gatgctgtccctaacccatcgaaagagcagctagtagatgttgttcagaggcatttcatg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gatgctgtccctaacccatcgaaagagcagctagtagatgttgttcagaggcatttcatg 245
Query: 610 tcccagcaaatggacgagttgcaggtgattatgggatttgtccaagctgctaagaggctc 669
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 246 tcccagcaaatggacgagttgcaggtgattatgggatttgtcccagctgctaagaggctc 305
Query: 670 aagactatgtgcaaatgatgg 690
|||||||||||||||||||||
Sbjct: 306 aagactatgtgcaaatgatgg 326
>gnl|LJGI|TC77224 similar to UniRef100_A7NTI3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1414
Score = 607 bits (306), Expect = e-173
Identities = 534/610 (87%)
Strand = Plus / Plus
Query: 64 cagagctgtggagatagcagcgaagaagagctctccgtgctccctcgtcacaccaaggtg 123
|||||||| |||||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 272 cagagctgcggagatagcagcgaggaggagctttccgtcctccctcgccacaccaaggtg 331
Query: 124 gttgtcaccggaaacaaccgcaccaaatccgtactcgttggtcttcagggagttgtcaag 183
||||| ||||| || ||||| |||||||| || ||||||||||| || ||||| || |||
Sbjct: 332 gttgttaccggcaataaccgtaccaaatcggtcctcgttggtctccaaggagtcgttaag 391
Query: 184 aaagccgttggcctcggtggttggcattggctggttcttactaatggtattgaagtgaag 243
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 392 aaagccgttggactcggtggttggcattggctggttcttacgaatggaattgaagtgaag 451
Query: 244 ctgcagaggaatgcccttagtgtgattgaagcacccaccgggaatgaggaagatgatgac 303
|||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 452 ctgcagaggaatgctcttagtgtgattgaagcacccactggcaatgaggaagatgatgat 511
Query: 304 cttgaatttgaaaatacgcagtggaatggatccgatatggcatctgatgacacacaaaag 363
||||||||||||||| ||| ||||||||||| ||||||||||| || |||||||| |||
Sbjct: 512 cttgaatttgaaaatgtgcaatggaatggatcagatatggcatcggacgacacacagaag 571
Query: 364 tcccacaaatcaaggcacaggacacatagatcattaggatcatctcacaagactacaagc 423
|||| ||||| |||||||| | |||||||||| ||||||||||||||||| | ||
Sbjct: 572 acccataaatcgaggcacagaatgaatagatcattgggatcatctcacaagaccatgagt 631
Query: 424 aggtccttctctgctgattcccagtctaaaggatcaatttctatgccccatggatggacg 483
||||||||||||| |||||| |||||||| || || || ||||| | ||||| | | |
Sbjct: 632 aggtccttctctggtgattcacagtctaaggggtccgttactatgactcatgggtccatg 691
Query: 484 aaggttgacttgagcaaattggagatggctgcattgtggagatattggcgacacttcaat 543
|||||||||||||||||| | || |||||||| |||||||||||||||||||| || |||
Sbjct: 692 aaggttgacttgagcaaacttgaaatggctgctttgtggagatattggcgacattttaat 751
Query: 544 ctggtggatgctgtccctaacccatcgaaagagcagctagtagatgttgttcagaggcat 603
|| |||||||| |||| || ||||| ||||||||||||||||| | |||||||||||||
Sbjct: 752 ctagtggatgccatcccaaatccatcaaaagagcagctagtagacggtgttcagaggcat 811
Query: 604 ttcatgtcccagcaaatggacgagttgcaggtgattatgggatttgtccaagctgctaag 663
|||||||| |||||||| |||||||||||||| || ||||| ||||||| |||||| |||
Sbjct: 812 ttcatgtctcagcaaatcgacgagttgcaggtcatcatggggtttgtcccagctgcaaag 871
Query: 664 aggctcaaga 673
||||||||||
Sbjct: 872 aggctcaaga 881
>gnl|LJGI|DC595811 similar to UniRef100_A7USI0 Cluster: AGAP000318-PA; n=1; Anopheles
gambiae str. PEST|Rep: AGAP000318-PA - Anopheles gambiae
str. PEST, partial (8%)
Length = 273
Score = 159 bits (80), Expect = 3e-38
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 atgctggaagcaacaatggaaagctcttcagtcaatggtggtggtgatcgattctctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atgctggaagcaacaatggaaagctcttcagtcaatggtggtggtgatcgattctctcag 253
Query: 61 ttgcagagctgtggagatag 80
||||||||||||||||||||
Sbjct: 254 ttgcagagctgtggagatag 273
>gnl|LJGI|FS347551 homologue to UniRef100_A7NTI3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 407
Score = 153 bits (77), Expect = 2e-36
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 614 agcaaatggacgagttgcaggtgattatgggatttgtccaagctgctaagaggctcaaga 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcaaatggacgagttgcaggtgattatgggatttgtccaagctgctaagaggctcaaga 314
Query: 674 ctatgtgcaaatgatgg 690
|||||||||||||||||
Sbjct: 313 ctatgtgcaaatgatgg 297
>gnl|LJGI|FS320858 similar to UniRef100_A7QPE0 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 720
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atgctggaagcaacaatggaaagctcttcagtcaatggtggt 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgctggaagcaacaatggaaagctcttcagtcaatggtggt 720